how the quality score is calculated by nanostat

Question

how the quality score is calculated by nanostat

ShannonDaddy opened this issue 3 years ago · 3 comments

Hi，we found the weird quality score given by nanostat 1.5.0 which is inconsistent with our manual calculation. what's the problem here? please help us, thanks!

nanostat result:

manual calculation:

Answer 1 · 2021-12-16T21:08:26.000Z

I would like to refer you to this post on my blog:
https://gigabaseorgigabyte.wordpress.com/2017/06/26/averaging-basecall-quality-scores-the-right-way/

Answer 2 · 2021-12-17T00:42:24.000Z

I would like to refer you to this post on my blog: https://gigabaseorgigabyte.wordpress.com/2017/06/26/averaging-basecall-quality-scores-the-right-way/

OK，thanks，I‘ll check that blog.

Answer 3 · 2021-12-17T18:47:20.000Z

Feel free to let me know if you have further questions.