Pinned Repositories
amethst_service
AMETHST, or Analysis METHod Selection Tool, is an automated pipeline that makes it possible to objectively assess the relative performance of multiple analysis methods applied to annotation abundance data. Utilizing objective, permutation-based statistics, it can determine the best performing analysis from any arbitrary collection of analyses, and can also determine the degree to which each analysis step (e.g. normalization and reprocessing of the data, selection of distance/dissimilarity metric) affects the results produced by each analysis method.
ansible
AWE_develop
CARMA3
Taxonomic classification of metagenomic shotgun sequences
cutadapt
cutadapt removes adapter sequences from sequencing reads
DynFMI
Dynamic FM-Index for a Collection of Texts
OpenStackMaster
Perl script and modules for the instantiation of, configuration of and communication with multiple VMs in an Openstack environment
sage-ecr
SAGE Edge Code Repository
sage-storage-api
Storage API server for the SAGE project
SODOKU
a simple software deployment and configuration system
wgerlach's Repositories
wgerlach/awe-monitor
Monitor for the AWE server
wgerlach/skyport-develop-environment
wgerlach/docker-nfs-server
wgerlach/Skyport2
Skyport2 framework for large scale data management and reproducible multi-cloud workflow execution
wgerlach/cwl-v1.1
In development version of the future CWL v1.1 specification
wgerlach/docker-timemachine
A docker container that compiles the lastest Netatalk to run a Time Machine server.
wgerlach/pocketmine-mp
A Docker container for Pocketmine-MP
wgerlach/authServer
oAuth authentication server with rights management
wgerlach/gerbera
UPnP Media Server for 2018 (Based on MediaTomb)
wgerlach/testwf
wgerlach/ansible
wgerlach/Latex
Dockerfile for Latex
wgerlach/mixs
“Minimum Information about any (X) Sequence” (MIxS) specification
wgerlach/myM5NR
local version of M5NR
wgerlach/go-dockerclient
Go client for the Docker remote API.
wgerlach/CARMA3
Taxonomic classification of metagenomic shotgun sequences
wgerlach/python-awe
python lib for AWE REST API
wgerlach/Skycore
Tool to load docker images into the docker engine
wgerlach/sensor_hacking
playground
wgerlach/MG-RAST-infrastructure
CoreOS/Fleet Infrastructure for MG-RAST
wgerlach/OpenStackMaster
Perl script and modules for the instantiation of, configuration of and communication with multiple VMs in an Openstack environment
wgerlach/rabbitmq
Docker Official Image packaging for RabbitMQ
wgerlach/mothur
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
wgerlach/cutadapt
cutadapt removes adapter sequences from sequencing reads
wgerlach/amethst_service
AMETHST, or Analysis METHod Selection Tool, is an automated pipeline that makes it possible to objectively assess the relative performance of multiple analysis methods applied to annotation abundance data. Utilizing objective, permutation-based statistics, it can determine the best performing analysis from any arbitrary collection of analyses, and can also determine the degree to which each analysis step (e.g. normalization and reprocessing of the data, selection of distance/dissimilarity metric) affects the results produced by each analysis method.
wgerlach/deploy_tools
deploy_tools
wgerlach/MG-RASTv4
next generation metagenome analysis
wgerlach/toolbox
bring your tools with you
wgerlach/AWE_develop
wgerlach/golib