whitneyt1

Pinned Repositories

loupeR
Convert Seurat objects to 10x Genomics Loupe files.
Language:R96 10 5215
cell2cell
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
Language:Python56 3 3712
numbat
Haplotype-aware CNV analysis from single-cell RNA-seq
Language:R165 9 18723
semla
Language:R58 6 345
liana-py
LIANA+: an all-in-one framework for cell-cell communication
Language:Python162 2 10821
seurat
R toolkit for single cell genomics
Language:R2.3k 73 8k912
dittoSeq
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
Language:R0 0 00
intro-comp-wrkflw
tutorial on common data science toolkit harmonization
Language:Jupyter Notebook0 0 00
numbat
Haplotype-aware CNV analysis from single-cell RNA-seq
Language:R00
seurat-wrappers
Community-provided extensions to Seurat
Language:R0 0 00

whitneyt1's Repositories

whitneyt1/dittoSeq
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
Language:R0 0 00
whitneyt1/intro-comp-wrkflw
tutorial on common data science toolkit harmonization
Language:Jupyter Notebook0 0 00
whitneyt1/numbat
Haplotype-aware CNV analysis from single-cell RNA-seq
Language:R00
whitneyt1/seurat-wrappers
Community-provided extensions to Seurat
Language:R0 0 00