Issues
- 4
- 11
- 2
Conflict to install cell2cell
#56 opened by Capiques - 12
c2c.analysis.run_tensor_cell2cell_pipeline
#58 opened by Iammaai - 2
can't run bash -i setup_env.sh --conda --gpu --kernel (python 3.10); the env is incompatible in python 3.7 when installing liana-py liana-R pytorch cell2cell togather
#60 opened by huiyijiangling - 1
- 5
Large number of significant interactions
#32 opened by joan-yanqiong - 1
Too few dimensions in the tensor (issue)
#57 opened by AtheerAS - 3
- 1
Example not working
#53 opened by imerelli - 2
Liana_tensor_c2c: Error setting up conda environment with Basilisk, no module named scipy
#35 opened by reneemoerkens - 1
- 2
`c2c.io.read_data.load_tensor` loads NoneType
#48 opened by paupaiz - 5
- 1
The way to address TypeError: Passing a set as an indexer is not supported. Use a list instead.
#52 opened by Pangjing-Wu - 3
Spatial LIANA x cell2cell analysis in R
#51 opened by Qirongmao97 - 1
- 0
- 2
c2c.tensor.InteractionTensor TypeError
#34 opened by mabro7766 - 3
- 8
predicting on new data
#29 opened by Sophon-0 - 7
IndexError at permutation step
#28 opened by joan-yanqiong - 7
tensor.elbow_rank_selection - input must be Tensor not numpy.ndarray error for InteractionTensor made with how='outer'
#10 opened by tomthomas3000 - 2
Gene expression normalization
#27 opened by joan-yanqiong - 1
extract LR pairs in each factor
#22 opened by Wulin-Tan - 1
Legends not appearing in plot
#19 opened by dnjst - 6
Choices of upper_rank and tf_type
#16 opened by deepcompbio - 5
Elbow Rank 1?
#25 opened by inofechm - 2
Importance of sorting contexts
#14 opened by deepcompbio - 3
tensor.compute_tensor_factorization result is highly dependent on random_state
#13 opened by deepcompbio - 0
- 2
c2c.tensor.InteractionTensor error
#7 opened by gdk43 - 1
- 2
- 0
things to add in the README
#2 opened by cjos238