Pinned Repositories
MicrobeMod
A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing
canu
A single molecule sequence assembler for genomes large and small.
Deepbinner
a signal-level demultiplexer for Oxford Nanopore reads
Dropbox-Uploader
Dropbox Uploader is a BASH script which can be used to upload, download, list or delete files from Dropbox, an online file sharing, synchronization and backup service.
Integron_Finder
Bioinformatics tool to find integrons in bacterial genomes
iso-3166-2
A publicly available dataset containing the countries and administrative divisions as defined in ISO 3166-2.After much research into how to best structure the geospacial data for happiest I made the decision to use ISO 3166-2 as the foundation. This repo contains JSON data representing ISO 3166-2 with the countries and divisions reverse geocoded; d
krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
pandora
Pan-genome inference and genotyping with long noisy or short accurate reads
Porechop
adapter trimmer for Oxford Nanopore reads
racon-gpu
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116
winterlich's Repositories
winterlich/canu
A single molecule sequence assembler for genomes large and small.
winterlich/Deepbinner
a signal-level demultiplexer for Oxford Nanopore reads
winterlich/Dropbox-Uploader
Dropbox Uploader is a BASH script which can be used to upload, download, list or delete files from Dropbox, an online file sharing, synchronization and backup service.
winterlich/Integron_Finder
Bioinformatics tool to find integrons in bacterial genomes
winterlich/iso-3166-2
A publicly available dataset containing the countries and administrative divisions as defined in ISO 3166-2.After much research into how to best structure the geospacial data for happiest I made the decision to use ISO 3166-2 as the foundation. This repo contains JSON data representing ISO 3166-2 with the countries and divisions reverse geocoded; d
winterlich/krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
winterlich/pandora
Pan-genome inference and genotyping with long noisy or short accurate reads
winterlich/Porechop
adapter trimmer for Oxford Nanopore reads
winterlich/racon-gpu
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116