Pinned Repositories
2014-06-10-spelman
Materials for Software Carpentry Workshop at Spelman College
BioDS-Make-20210722
BioDS-Workshop-NCBI
cloud-kmers
Lesssons on analyzing high-thoughput sequencing datasets by counting kmers on cloud computing instances
FGS
FragGeneScan -- hidden Markov model for predicting prokaryotic coding regions
testrepo-2013-06-chicago
This is a test repository with some small token datasets and some files created for the 2013-06-chicago software carpentry boot camp at the University of Chicago (go Maroons). Feel free to poke around.
testrepo-2014-05-29-ucsd
This is a teaching repository for CSHL.
thumbnailpolish
Scripts to visualize the thumbnail images from illumina sequencing machines
uchicago-data221
Class materials for Intro Machine Learning / Data Science at University of
uchicago-data227
Materials for Intro Data Visualization in Data Science at Uchicago
wltrimbl's Repositories
wltrimbl/thumbnailpolish
Scripts to visualize the thumbnail images from illumina sequencing machines
wltrimbl/cloud-kmers
Lesssons on analyzing high-thoughput sequencing datasets by counting kmers on cloud computing instances
wltrimbl/2016-sourmash-tax
Taxonomic breakdown of metagenomes using sourmash.
wltrimbl/2018-10-05-UCSF-Python
Page for 2018-10-05 Python UCSF workshop
wltrimbl/Amplicon_Analysis
wltrimbl/angus
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
wltrimbl/anl-seq-service
wltrimbl/argonnesoils2017tutorial
repo for 2016 EDAMAME tutorials
wltrimbl/cwltool
Common Workflow Language reference implementation
wltrimbl/ea-utils
Automatically exported from code.google.com/p/ea-utils
wltrimbl/google-python-exercises3
wltrimbl/idemp
Barcode demultiplex for Illumina I1, R1, R2 fastq.gz files
wltrimbl/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
wltrimbl/matR
Metagenomics Analysis Tools
wltrimbl/MaxBin-2.2
wltrimbl/MG-RAST-Tutorials
wltrimbl/MGRASTer
API Client for the MG-RAST Server
wltrimbl/misctools
wltrimbl/moreplanets
wltrimbl/myM5NR
local version of M5NR
wltrimbl/pyani
Python module for average nucleotide identity analyses
wltrimbl/qiime_tutorial
qiime_tutorial
wltrimbl/skewer
wltrimbl/Skyport2
Infrastructure setup for app/service development.
wltrimbl/testwf
wltrimbl/tnseq
documentation and scripts for analyzing Tn-seq data
wltrimbl/tutorial-ngs-2014
wltrimbl/UTK-MGRAST
wltrimbl/vitalsigns-departmentdirectory
This repository contains data and scripts to show lists of doctors at and highlights of the CMS sunshine data.
wltrimbl/whatcouldgowrong