wmacnair/psupertime

Cell identifiers not included in the results object

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Using a SIngleCellExperiment object as input for psupertime I was interested in the beta values of relevant genes and pseudotime values per cell.

The result object doesn't include the original cell identifiers and while I expect the new index to correspond to the original i.e. the same ordering it would be nice to have the original cell identifiers present under result$proj_dt similar to how gene identifiers are present under result$beta_dt

Hey, thanks for pointing this out. Your assumption is correct that they do have the same ordering, but I can add the cell ids to proj_dt as well.