wsnoble

University of WashingtonSeattle, WA

Pinned Repositories

spectrum_utils
Python package for efficient mass spectrometry data processing and visualization
Language:Python139 6 5620
MEME
MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks
Language:C8 2 102
crux-toolkit
Language:C++32 14 60126
gnomad_python_api
🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).
Language:Python19 4 119
segway
Application for semi-automated genomic annotation.
Language:Shell13 4 1567
casanovo
De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model
Language:Python112 9 22640
crema
Confidence Estimation for Mass Spectrometry Proteomics
Language:Python12 6 81
Pepper
Peptide coefficient predictor
Language:Jupyter Notebook9 2 42
mokapot
Fast and flexible semi-supervised learning for peptide detection in Python
Language:Python43 7 4015
config-files
Various config files
Language:Shell1 1 00