xchang1

Pinned Repositories

minigraph
Sequence-to-graph mapper and graph generator
Language:C423 29 11638
GraphAligner
Language:C++263 15 10133
vg
tools for working with genome variation graphs
Language:C++1.1k 47 2.1k195
gbwtgraph
GBWT-based handle graph
Language:C++0 0 00
giraffeCapExperiments
Little experiments on a better mapq cap function
Language:Jupyter Notebook0 1 00
starfish
*fish -- A standardized analysis pipeline for image-based transcriptomics
Language:Python0 1 00
structures
A collection of c++ data structures I've coded up for various projects
Language:C++0 1 00
toil-vg
Distributed and cloud computing framework for vg
Language:Python0 1 00
ucscthesis
LaTeX templates for UCSC thesis and/or advancement (thesis proposal)
Language:TeX00
vg
tools for working with genome variation graphs
Language:C++0 1 00

xchang1's Repositories

xchang1/gbwtgraph
GBWT-based handle graph
Language:C++0 0 00
xchang1/giraffeCapExperiments
Little experiments on a better mapq cap function
Language:Jupyter Notebook0 1 00
xchang1/starfish
*fish -- A standardized analysis pipeline for image-based transcriptomics
Language:Python0 1 00
xchang1/structures
A collection of c++ data structures I've coded up for various projects
Language:C++0 1 00
xchang1/toil-vg
Distributed and cloud computing framework for vg
Language:Python0 1 00
xchang1/ucscthesis
LaTeX templates for UCSC thesis and/or advancement (thesis proposal)
Language:TeX00
xchang1/vg
tools for working with genome variation graphs
Language:C++0 1 00