xiechengyong123

Pinned Repositories

chatgpt_academic
科研工作专用ChatGPT拓展，特别优化学术Paper润色体验，支持自定义快捷按钮，支持markdown表格显示，Tex公式双显示，代码显示功能完善，新增本地Python工程剖析功能/自我剖析功能
Language:Python1 0 00
cmapM
Connectivity Map analysis in MATLAB
Language:C1 0 00
coloc
Language:R1 1 00
eQTL_to_TWAS
Methods for converting eQTL summary statistics into TWAS SNP-weights
Language:R1 0 00
FineMap
Language:R10
friendly2MR
Language:R42 3 07
GWASTutorial
GWAS Tutorial for Beginners
Language:Jupyter Notebook1 0 00
matplotlib-cn
matplotlib中文文档
Language:JavaScript1 0 00
MR-APSS
Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics
Language:R1 0 00
xQTLbiolinks
xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
Language:R2 0 00

xiechengyong123's Repositories

xiechengyong123/EnsDb.Hsapiens.v105
Ensembl release 105 annotation databases
xiechengyong123/Fine_Mapping
Fine mapping of genes associated with Parkinson's Disease using a variety of methods
xiechengyong123/caviar
xiechengyong123/lipid_covid19
xiechengyong123/cmapM
Connectivity Map analysis in MATLAB
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xiechengyong123/nhanesR
xiechengyong123/fizi
Leveraging functional information to improve GWAS summary statistic imputation
xiechengyong123/gwas-vcf-specification
Specification for the GWAS-VCF format (manuscript in preparation)
xiechengyong123/plink2R
Read PLINK BED/BIM/FAM files into R
xiechengyong123/TWAS
xiechengyong123/gtex-v8
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
xiechengyong123/eMAGMA-tutorial
A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.
xiechengyong123/moloc
xiechengyong123/GPA
GPA: Genetic analysis incorporating Pleiotropy and Annotation
xiechengyong123/SummaryLasso
:exclamation: This is a read-only mirror of the CRAN R package repository. SummaryLasso — Building Polygenic Risk Score Using GWAS Summary Statistics
xiechengyong123/GWA_tutorial
A comprehensive tutorial about GWAS and PRS
xiechengyong123/plinkbinr
R package that contains plink binaries for windows, mac and linux
xiechengyong123/liftOverPlink
A wrapper for liftOver for converting plink genotype data between different genome reference builds
xiechengyong123/JM-GWAS
GWAS pipeline: Vitamin-D in the UKB including SMR analysis
xiechengyong123/fgwas
Functional genomics and genome-wide association studies
xiechengyong123/qqman
An R package for creating Q-Q and manhattan plots from GWAS results
xiechengyong123/FM-summary
Fine-mapping method only using summary statistics
xiechengyong123/postgwas
postgwas package for R
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