/RBioFormats

R interface to the Bio-Formats library

Primary LanguageR

Installation

# install.packages("devtools")
devtools::install_github("aoles/RBioFormats")

Caveats

If you get the java.lang.OutOfMemoryError: Java heap space error, try increasing the maximum heap size by supplying the -Xmx parameter before the Java Virtual Machine is initialized. For example, use

options( java.parameters = "-Xmx4g" )
library( "RBioFormats" )

to override the default setting and assign 4 gigabytes of heap space to the Java environment.