yal054
Assistant Professor Washington University School of Medicine
Washington University School of Medicine
yal054's Stars
multiz/multiz
DNA multiple sequence aligner, official version from Penn State's Miller Lab
CshlSiepelLab/phast
PHAST
zhanglabtools/DNADataAugmentation
Source code for paper 'Simple tricks of convolutional neural network architectures improve DNA–protein binding prediction'. In addition, some reusable code is also sort out for further use.
jxzb1988/MMQTL
MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control for population structure and relatedness
pavlin-policar/openTSNE
Extensible, parallel implementations of t-SNE
databio/bedshift_analysis
d2l-ai/d2l-en
Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.
mli/paper-reading
深度学习经典、新论文逐段精读
rosasalberto/mil
Multiple instance learning library for Python
crazyhottommy/The-world-of-faculty
resources for faculty
ShusenTang/Dive-into-DL-PyTorch
本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为PyTorch实现。
citation-style-language/styles
Official repository for Citation Style Language (CSL) citation styles.
broadinstitute/CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
BICCN/BCDC-Metadata
Interim repository for BCDC metadata per quarter.
mkandes/galyleo
A shell utility to help you launch Jupyter notebooks on high-performance computing systems in a simple, secure way.
theislab/scarches
Reference mapping for single-cell genomics
KrishnaswamyLab/PHATE
PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.
skorch-dev/skorch
A scikit-learn compatible neural network library that wraps PyTorch
aladdinpersson/Machine-Learning-Collection
A resource for learning about Machine learning & Deep Learning
wangjuan001/hicplus
MouseLand/cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
kubeflow/pytorch-operator
PyTorch on Kubernetes
SamLynnEvans/Transformer
Transformer seq2seq model, program that can build a language translator from parallel corpus
hhcho/densvis
Density-preserving data visualization tools den-SNE and densMAP
dphansti/liftOverBedpe
A liftOver wrapper to accomodate BEDPE files
kipoi/kipoi
Kipoi's model zoo API
nemoarchive/documentation
Documentation, readme's, FAQs, SOPs, etc...
kipoi/kipoiseq
Standard set of data-loaders for training and making predictions for DNA sequence-based models.
google-deepmind/deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
shap/shap
A game theoretic approach to explain the output of any machine learning model.