yangchen2

Biomedical Sciences PhD Student at UC San Diego

Pinned Repositories

qadabra
Snakemake workflow for comparison of differential abundance ranks
Language:Python13 6 304
BIRDMAn
Bayesian Inferential Regression for Differential Microbiome Analysis
Language:Python00
Differential-Abundance-Analyses
00
gallo_AD_peds
Language:Jupyter Notebook0 1 01
gallo_skin-gut_axis
Analysis repository for our manuscript: Dermal injury drives a skin-gut axis that disrupts the intestinal microbiome and intestinal immune homeostasis
Language:Jupyter Notebook00
Gantt_chart
Language:Jupyter Notebook00
popcat
meow :O
00
Publications
Links to all my published peer-reviewed publications
00
qadabra
Snakemake workflow for comparison of differential abundance ranks
Language:Python00
qadabra_benchmarking
Language:Python1 1 00

yangchen2's Repositories

yangchen2/qadabra_benchmarking
Language:Python1 1 00
yangchen2/BIRDMAn
Bayesian Inferential Regression for Differential Microbiome Analysis
Language:Python00
yangchen2/Differential-Abundance-Analyses
00
yangchen2/gallo_AD_peds
Language:Jupyter Notebook0 1 01
yangchen2/gallo_skin-gut_axis
Analysis repository for our manuscript: Dermal injury drives a skin-gut axis that disrupts the intestinal microbiome and intestinal immune homeostasis
Language:Jupyter Notebook00
yangchen2/Gantt_chart
Language:Jupyter Notebook00
yangchen2/popcat
meow :O
00
yangchen2/Publications
Links to all my published peer-reviewed publications
00
yangchen2/qadabra
Snakemake workflow for comparison of differential abundance ranks
Language:Python00
yangchen2/Skin-Gut-Axis-AGP
Language:Shell
yangchen2/source-yangchen2.github.io
Language:SCSS1 0
yangchen2/xebec
Snakemake pipeline for microbiome diversity effect size benchmarking
Language:Python0 0
yangchen2/yangchen2.github.io
My personal portfolio
1 0