Pinned Repositories
dx-toolkit
DNAnexus platform client libraries
bcbio-dnanexus-wrapper
Repository to hold wrapper apps for bcbio CWL on DNAnexus
bcbio-nextgen-vm
Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines
blogpost_appendix
HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
hippie
HIPPIE - a high-throughput identification pipeline for promoter interacting enhancer elements
mapping_example
viral-pipelines
viral-ngs: complete pipelines
viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
wdl
Workflow Description Language - Specification and Implementations
yihchii's Repositories
yihchii/hippie
HIPPIE - a high-throughput identification pipeline for promoter interacting enhancer elements
yihchii/bcbio-dnanexus-wrapper
Repository to hold wrapper apps for bcbio CWL on DNAnexus
yihchii/bcbio-nextgen-vm
Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines
yihchii/blogpost_appendix
yihchii/HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
yihchii/mapping_example
yihchii/viral-pipelines
viral-ngs: complete pipelines
yihchii/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
yihchii/wdl
Workflow Description Language - Specification and Implementations