Pinned Repositories
annotated_deep_learning_paper_implementations
🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
AutoDock-Vina
AutoDock Vina
autogluon
AutoGluon: AutoML for Text, Image, and Tabular Data
awesome-robotics-ee-opensource
(CN) 机器人、电子设计、机器学习中文开源项目列表 (by 云飞机器人实验室)
AwsomeCADD
好的CADD教程，资源总结
BAPA
BAPA preprocessing scripts and model
BEPb
Config files for my GitHub profile.
CS_Python_Notes
Some notes about computer sience and Python.
deepmd-kit
A deep learning package for many-body potential energy representation and molecular dynamics
Pymol-script-repo
Collected scripts for Pymol
yqyang733's Repositories
yqyang733/annotated_deep_learning_paper_implementations
🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
yqyang733/Pymol-script-repo
Collected scripts for Pymol
yqyang733/AwsomeCADD
好的CADD教程，资源总结
yqyang733/BEPb
Config files for my GitHub profile.
yqyang733/Bio-iqb
yqyang733/ColabFold
Making Protein folding accessible to all via Google Colab!
yqyang733/colvars
Collective variables module for molecular simulation and analysis programs
yqyang733/D3AI-CoV
yqyang733/D3Similarity
yqyang733/Deep_AMP
Generator and regressor neural networks for antimicrobial peptides
yqyang733/FAST
Fusion models for Atomic and molecular STructures (FAST)
yqyang733/FEPRNASetup-gmx
yqyang733/Grokking-Deep-Learning
this repository accompanies the book "Grokking Deep Learning"
yqyang733/HydRA
yqyang733/Journal_Club_ZJU
yqyang733/linux
yqyang733/Macformer
yqyang733/Machine_Learning_Models
yqyang733/mkanalysis
mk series: some biophysics MD/MC analysis scripts
yqyang733/mkrun
mk series: some biophysics MD build and run scripts
yqyang733/Molecular-Dynamics-Simulation
Sample codes for my book on molecular dynamics simulation
yqyang733/python
yqyang733/RFdiffusion
Code for running RFdiffusion
yqyang733/RoseTTAFold-All-Atom
yqyang733/StandardMD-Amber
Tutorials for Standard MD with Amber
yqyang733/StandardMD-NAMD
Tutorials for Standard MD with NAMD
yqyang733/StandardMD-OpenMM
Tutorials for Standard MD with OpenMM
yqyang733/torchexplorer
Interactively inspect module inputs, outputs, parameters, and gradients.
yqyang733/transformerCPI2.0
Sequence-to-drug concept adds a perspective on drug design. It can serve as an alternative method to SBDD, particularly for proteins that do not yet have high-quality 3D structures available.
yqyang733/zjuthesis
Zhejiang University Graduation Thesis LaTeX Template