/CellMap

Primary LanguageJupyter Notebook

CellMap - RNA landscape inference method

The CellMap is a RNA landscape inference method based on the graph Hodge decomposition.

Installation

To install CellMap package, use pip as follows:

$ pip install cellmap

Requirements

  • Python3
  • matplotlib
  • numpy
  • scipy
  • scikit-learn

Turtorial

Turtorials are prepared by jupyter notebook.

Visualization

We prepare original visualization system CellMap viewer.