Pinned Repositories
cdkr
Integrating R and the CDK
depict
depict package for drawing molecules in R
bioinformaticstoolkit
Build and deploy cross platform bioinformatic utilities with Rust.
chemdoodle
htmlwidgets for chemdoodle web components
ferritin
protein utilities in Rust
msaR
The BioJS MSA viewer wrapped into an R package
phylocanvas
htmlwidgets for phylocanvas
plm-local
run protein language models locally
quickD3map
Generate quick d3 maps from location data in pandas
simplecomponent
a simple component to show use of D3 from Reagent
zachcp's Repositories
zachcp/ferritin
protein utilities in Rust
zachcp/bioinformaticstoolkit
Build and deploy cross platform bioinformatic utilities with Rust.
zachcp/molnodes-utils
Utilities and experiments with blender and Molecular Nodes
zachcp/pseutils
Make pymol session files vieweable on the web
zachcp/cdkr
Integrating R and the CDK
zachcp/plm-local
run protein language models locally
zachcp/aiosql
Simple SQL in Python
zachcp/AMPLIFY
zachcp/antismash-utilities
antismash-utilities
zachcp/bioconda-recipes
Conda recipes for the bioconda channel.
zachcp/candle
Minimalist ML framework for Rust
zachcp/candle-sampling
Sampling techniques for Candle.
zachcp/cljdart-experiment
Playing with ClojureDart and Flutter
zachcp/depict
depict package for drawing molecules in R
zachcp/exon
Exon is an OLAP query engine specifically for biology and life science applications.
zachcp/flint
SPARQL DSL library for Clojure(Script)
zachcp/geometry-script
A scripting API for Blender's Geometry Nodes
zachcp/LigandMPNN
zachcp/mol-view-spec
zachcp/molstar
A comprehensive macromolecular library
zachcp/molstarspec-docs
Docs made with quarto-molstar
zachcp/neohtop
💪🏻 system monitoring on steroids
zachcp/NodeToPython
Convert Blender node groups to a Python add-on
zachcp/pdbtbx
A library to open/edit/save (crystallographic) Protein Data Bank (PDB) and mmCIF files in Rust.
zachcp/protein-renderer
rust lib for proteins on Bevy
zachcp/ProteinMPNN
Code for the ProteinMPNN paper
zachcp/quarto-molstar
Shortcode to embed proteins and trajectories with Mol*
zachcp/rcdklibs
An R wrapper around the CDK libraries
zachcp/wobble
Minimal CLI on top of Blender and Molecular Nodes
zachcp/zed
Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.