A FSL version for use with Slurm currently in use at The University of Arizona. Includes a number of modified scripts which call on sbatch, a Slurm jub submission system.
These have been confirmed to work in a lab environment with standard args.
- bedpostx
- bedpostx_postproc.sh
- bedpostx_preproc.sh
- bedpostx_single_slice.sh
- fsl_sub
- fslvbm_1_bet
- fslvbm_2_template
- fslvbm_3_proc
- randomise_parallel
- tbss_2_reg
These likely do not work at this time. Haven't had time to test them, nor does our lab commonly use them. They would require minimal changes in the case that they do fail.
- dual_regression
- feat_gm_prepare
- possumX
- qboot_parallel
- run_first_all
These likely do not work at this time. Haven't had time to test them, yet.
- bedpostx_gpu
- bedpostx_postproc_gpu.sh
- merge_parts_gpu
- split_parts_gpu
- xfibres_gpu
Simply copy these to your FSL bin directory and overwrite the files.