zavolanlab/PAQR_KAPAC

Issues

• Missing conda packages break creation of py2_paqr environment.

  #20 opened 4 years ago by ClarinetK622
  2

• Errors when running PAQR step2

  #19 opened 4 years ago by Sylarair
  14

• Updating mm10 annotation files with PolyASite 2.0 release

  #15 opened 5 years ago by SamBryce-Smith
  6

• Further question about how to properly set up the sample relationships

  #14 opened 5 years ago by aleighbrown
  3

• Intronic polyadenylation quantification

  #17 opened 5 years ago by vvdnoord
  2

• config.yaml has a readlength parameters which is not mentioned in the README

  #13 opened 5 years ago by aleighbrown
  1

• Error in rule infer_relative_usage UnboundLocalError: local variable 'end_idx' referenced before assignment

  #9 opened 5 years ago by aleighbrown
  4

• Error in rule infer_relative_usage: TypeError: not all arguments converted during string formatting

  #11 opened 5 years ago by yangjywhu
  1

• annotation files for hg19

  #10 opened 5 years ago by yangjywhu
  1

• use custome annotation

  #5 opened 5 years ago by yuxinghai
  4

• Infer relative usage: IndexError: list index out of range

  #12 opened 5 years ago by peterkilfeather
  2

• snakemake symlink problem

  #8 opened 5 years ago by aleighbrown
  1

• Incorrect indentation in one of the scripts.

  #7 opened 5 years ago by AngryMaciek
  3

• Error in setting up the environment

  #6 opened 5 years ago by jchariker
  6

• Input files for KAPAC

  #4 opened 6 years ago by khandarius
  6

• annotation files for mm10

  #3 opened 6 years ago by xflicsu
  2

• README missing R and SRA tools version

  #2 opened 6 years ago by fgypas
  1

• Error when generating paqr_kapac virtual environment

  #1 opened 6 years ago by fgypas
  4