Pinned Repositories
flowsig
Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.
FlowSigAnalysis_2023
Python and R code used to produce the analysis in Almet et al. (2023), "Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics"
SpatialID
A cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding
spatialID
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