zhanyinx

Head of data science unit at European Institute for Oncology (IEO)

IEOMilan

Pinned Repositories

deepBlink
Threshold independent detection and localization of diffraction-limited spots.
Language:Python32 4 208
CaTCH
Language:C3 1 73
clonal_evolution
Language:Groovy00
hmmlearn
Hidden Markov Models in Python, with scikit-learn like API
Language:Python2 0 01
metagenomics
Nextflow implementation of metagenomics data analysis using MetaPhlAn
Language:Groovy00
NMSB_2019_redolfi_et_al
Language:Mathematica11
SPT_analysis
Language:Jupyter Notebook3 3 00
variantalker
Language:Python3 2 01
Zenk_Zhan_et_al_Nature2021
Language:C71
Zuin_Roth_Nature_2022
Language:R4 1 01

zhanyinx's Repositories

zhanyinx/Zenk_Zhan_et_al_Nature2021
Language:C71
zhanyinx/Zuin_Roth_Nature_2022
Language:R4 1 01
zhanyinx/CaTCH
Language:C3 1 73
zhanyinx/SPT_analysis
Language:Jupyter Notebook3 3 00
zhanyinx/variantalker
Language:Python3 2 01
zhanyinx/hmmlearn
Hidden Markov Models in Python, with scikit-learn like API
Language:Python2 0 01
zhanyinx/hic_scaling
Language:Python10
zhanyinx/NMSB_2019_redolfi_et_al
Language:Mathematica11
zhanyinx/clonal_evolution
Language:Groovy00
zhanyinx/metagenomics
Nextflow implementation of metagenomics data analysis using MetaPhlAn
Language:Groovy00
zhanyinx/atinbayeva_paper_2023
Language:Shell
zhanyinx/Coefficient_Variation
Language:MATLAB1
zhanyinx/Imaging_tania_project
Language:R
zhanyinx/Montegrappa-1.2
Language:C
zhanyinx/mydockerfiles
all my docker files
Language:Dockerfile
zhanyinx/NextQuant
Language:Python1
zhanyinx/pharm_screen
Language:Python
zhanyinx/refactored-octo-lamp
Spot detection
Language:Jupyter Notebook
zhanyinx/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
zhanyinx/zhanyinx