Association testing across all HLA type simultaneously

[oalavijeh]

Many thanks for this fantastic tool.

I was wondering if you had a suggestion for testing all the inferred HLA types simultaneously in a case control cohort? The vignette just looks at a single HLA type at a time. I could run this scripts per HLA type manually then correct the P-values for multiple testing manually but I was wondering if you had implemented such a tool internally?

All the best

[oalavijeh]

I ended up iterating over it with a loop