Pinned Repositories
apparent
A simple and flexible R package for accurate SNP-based parentage analysis in the absence of guiding information
asremlPlus
asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
Book3_Elements-of-Mathematics
Book_3_《数学要素》 | 鸢尾花书：从加减乘除到机器学习；上架；欢迎继续纠错，纠错多的同学还会有赠书！
circlator
A tool to circularize genome assemblies
dnds
Calculate the dn/ds (also pn and ps) value of cds
fastaselect
Extract sequences from a large fasta file
Genome-annotation-pipeline
Genome annotation
Vcf2Fasta
Convert a vcf file to a fasta file
zhutao1009
Config files for my GitHub profile.
zhutao1009's Repositories
zhutao1009/dnds
Calculate the dn/ds (also pn and ps) value of cds
zhutao1009/fastaselect
Extract sequences from a large fasta file
zhutao1009/Vcf2Fasta
Convert a vcf file to a fasta file
zhutao1009/bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
zhutao1009/Genome-annotation-pipeline
Genome annotation
zhutao1009/zhutao1009
Config files for my GitHub profile.
zhutao1009/apparent
A simple and flexible R package for accurate SNP-based parentage analysis in the absence of guiding information
zhutao1009/asremlPlus
asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models
zhutao1009/Book3_Elements-of-Mathematics
Book_3_《数学要素》 | 鸢尾花书：从加减乘除到机器学习；上架；欢迎继续纠错，纠错多的同学还会有赠书！
zhutao1009/circlator
A tool to circularize genome assemblies
zhutao1009/genomics_general
General tools for genomic analyses.
zhutao1009/Machine-Learning
:zap:机器学习实战（Python3）：kNN、决策树、贝叶斯、逻辑回归、SVM、线性回归、树回归
zhutao1009/Machine-learning-learning-notes
周志华《机器学习》又称西瓜书是一本较为全面的书籍，书中详细介绍了机器学习领域不同类型的算法(例如：监督学习、无监督学习、半监督学习、强化学习、集成降维、特征选择等)，记录了本人在学习过程中的理解思路与扩展知识点，希望对新人阅读西瓜书有所帮助！
zhutao1009/melon_concepts
西瓜书概念整理
zhutao1009/pyfasta
fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
zhutao1009/SNPGenie
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
zhutao1009/teleost_genomes_immune
zhutao1009/tutorials
Tutorials on phylogenetic and phylogenomic inference
zhutao1009/vcf-ref-fasta
zhutao1009/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
zhutao1009/vcf_uniq_variant
Find the population specific variants from VCF file.
zhutao1009/vgp-assembly
VGP repository for the genome assembly working group