Pinned Repositories
xswap
Python library (C++ backend) for degree-preserving network randomization
indirect-gwas
Fast GWAS on linear combinations of traits using only summary statistics
maxgcp
Maximum genetic component phenotyping. An advanced method for defining observational phenotypes using genetic information.
webgwas-backend
WebGWAS: Instant, free online genome-wide association studies. Server backend code.
abo_covid_analysis
Evaluating the association between blood group and COVID-19
course-notes
integration-review
Network Methods for Multiomic Data Integration: Review Paper for BMIN 501
phenotype_standardization
https://github.com/zietzm/phenotype_standardization/wiki
sumher_rs
Heritability and genetic correlation from GWAS. Wrapper around LDAK for fast parallel computation
webgwas-analysis
Figures and analysis for the WebGWAS project paper
zietzm's Repositories
zietzm/sumher_rs
Heritability and genetic correlation from GWAS. Wrapper around LDAK for fast parallel computation
zietzm/igwas
Fast GWAS on linear combinations of traits using only summary statistics - Rust re-implementation
zietzm/ukbb_resources
zietzm/micromanubot
A build tool for academic manuscripts
zietzm/webgwas-analysis
Figures and analysis for the WebGWAS project paper
zietzm/annotate
CLI tool for text annotation
zietzm/broom
Convert statistical analysis objects from R into tidy format
zietzm/catalog
Made with Manubot catalog (please add your manuscript!!)
zietzm/clock
Command line time tracker
zietzm/csvlens
Command line csv viewer
zietzm/hyperliquid-rust-sdk
zietzm/ldsc
LD Score Regression (LDSC)
zietzm/llm-ddi-extraction
zietzm/maxgcp-analysis
Boosting the genetic signal in phenotype definitions
zietzm/mdav
Data anonymization using maximum distance to the average vector (MDAV)
zietzm/mtag
Python command line tool for Multi-Trait Analysis of GWAS (MTAG)
zietzm/ndarray-linalg
Linear algebra package for rust-ndarray using LAPACK binding
zietzm/onsides
A resource of adverse drug effects extracted from FDA structured product labels
zietzm/onsides-task1
Evaluation of GPT methods for ADE term identification
zietzm/PhenotypeSimulator
zietzm/pqrs
Command line tool for inspecting Parquet files
zietzm/pymbend
Bending non-positive-definite matrices to positive-definite
zietzm/PyTinyTeX
Thin wrapper for "TinyTeX" (MIT)
zietzm/retreat-project
zietzm/webgwas
zietzm/webgwas-backend
zietzm/webgwas-frontend
zietzm/webgwas-legacy
zietzm/zietzm
zietzm/zietzm.github.io