/soil_N_metabolic

Simulating N fluxes in soils using genome-scale metabolic models

Primary LanguageJupyter NotebookMIT LicenseMIT

soil_N_metabolic

Simulating N fluxes in soils using genome-scale metabolic models

Repo for simulating soil microbial activity using 15 metabolic models of varying complexity All simulations carried out using COMETS2 via the cometspy package

Metabolic model sources: AOB and NOB from Perez Garcia et al 2015, BiGG database

Contact @zrwerbin@bu.edu with any questions or to request model files