Pinned Repositories
GLiMMIRS
GLiMMIRS: Generalized Linear Models for Measuring Interactions between Regulatory Sequences
ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
bisb_bootcamp_19
Material for UCSD Bioinformatics and Systems Biology PhD program Bootcamp, 2019
cse250a
Code for CSE 250A - Principles of Statistical Learning
cts_cnn
demux
A Snakemake pipeline for running single-cell demultiplexing simulations.
ensemble_distillation
ml_concepts
A collection of Jupyter notebooks containing tutorials for various machine learning concepts.
sc-power-analysis
Power analysis for scRNA-seq data
zrcjessica's Repositories
zrcjessica/sc-power-analysis
Power analysis for scRNA-seq data
zrcjessica/cts_cnn
zrcjessica/demux
A Snakemake pipeline for running single-cell demultiplexing simulations.
zrcjessica/ml_concepts
A collection of Jupyter notebooks containing tutorials for various machine learning concepts.
zrcjessica/cse250a
Code for CSE 250A - Principles of Statistical Learning
zrcjessica/ensemble_distillation
zrcjessica/ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
zrcjessica/as_analysis
A complete Snakemake pipeline for detecting allele specific expression
zrcjessica/bisb_bootcamp_19
Material for UCSD Bioinformatics and Systems Biology PhD program Bootcamp, 2019
zrcjessica/make_seurat
Run cellranger on snRNA-seq fastq files and create Seurat objecft
zrcjessica/CRSsim
Contains code and instructions for simulating CRISPR regulatory screens and assessing performance of different methods
zrcjessica/cse282
Some code for CSE 282: Bioinformatics Algorithms
zrcjessica/fusion_twas
methods for functional summary-based imputation
zrcjessica/gwas_tutorial
Introduction to GWAS and working with genotype data for UCSD BiSB Bootcamp 2018.
zrcjessica/highlight
Syntax highlighter for R
zrcjessica/ldsc
LD Score Regression (LDSC)
zrcjessica/med277
Final project for MED 277 - Biomedical Natural Language Processing
zrcjessica/RELICS
Regulatory Element Location Identification in CRISPR screens
zrcjessica/scatac_motif_analysis
zrcjessica/seurat
R toolkit for single cell genomics
zrcjessica/zrcjessica.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics