Pinned Repositories
100-Days-Of-ML-Code
100 Days of ML Coding
18S191
Course 18.S191 at MIT, Spring 2021 - Introduction to computational thinking with Julia:
aicsimageio
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
annotated-transformer
An annotated implementation of the Transformer paper.
awesome-bioimage-analysis-challenges
A list of awesome bioimage analysis challenges
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
awesome-biological-visualizations
A list of web-based interactive biological data visualizations.
Baysor
Bayesian Segmentation of Spatial Transcriptomics Data
big-fish
Toolbox for the analysis of smFISH images.
cell2sentence-ft
Cell2Sentence turns scRNA-seq data into text for LLM training.
zwdiscover's Repositories
zwdiscover/100-Days-Of-ML-Code
100 Days of ML Coding
zwdiscover/18S191
Course 18.S191 at MIT, Spring 2021 - Introduction to computational thinking with Julia:
zwdiscover/aicsimageio
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
zwdiscover/annotated-transformer
An annotated implementation of the Transformer paper.
zwdiscover/awesome-bioimage-analysis-challenges
A list of awesome bioimage analysis challenges
zwdiscover/Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
zwdiscover/awesome-biological-visualizations
A list of web-based interactive biological data visualizations.
zwdiscover/Baysor
Bayesian Segmentation of Spatial Transcriptomics Data
zwdiscover/big-fish
Toolbox for the analysis of smFISH images.
zwdiscover/cell2sentence-ft
Cell2Sentence turns scRNA-seq data into text for LLM training.
zwdiscover/datascience_book
zwdiscover/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
zwdiscover/forgi
An RNA manipulation library.
zwdiscover/formula-sheets
A repository for mathematics, machine learning and deep learning formula sheets created by Fady Morris
zwdiscover/GEN242
zwdiscover/JuliaDataScience
Book on Julia for Data Science
zwdiscover/LLMs-from-scratch
Implementing a ChatGPT-like LLM in PyTorch from scratch, step by step
zwdiscover/MERFISH_mouse_brain_receptor
zwdiscover/NetBID
Data-driven Network-based Bayesian Inference of Drivers
zwdiscover/notebook
Jupyter Interactive Notebook
zwdiscover/python-cheatsheet
Comprehensive Python Cheatsheet
zwdiscover/python_for_image_processing_APEER
https://www.youtube.com/playlist?list=PLHae9ggVvqPgyRQQOtENr6hK0m1UquGaG
zwdiscover/python_for_microscopists
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
zwdiscover/rnabio.org
website for the rnaseq course
zwdiscover/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
zwdiscover/seq
A high-performance, Pythonic language for bioinformatics
zwdiscover/seurat
R toolkit for single cell genomics
zwdiscover/single-cell-best-practices
https://www.sc-best-practices.org
zwdiscover/SMAP
zwdiscover/Spatial-Omics-Dataset