Issues
- 0
Cellranger count issue
#186 opened - 0
mkref probelm
#184 opened - 1
- 1
cellranger aggr combined two files' data?
#182 opened - 2
bash: cellranger: command not found
#181 opened - 0
cellranger-arc gtf file requirments
#180 opened - 1
cellranger process single-end scRNAseq
#179 opened - 4
UMI counting bug when reads duplicated
#177 opened - 2
Unable to auto-detect chemistry.
#167 opened - 0
- 2
- 0
- 0
Cellranger mkref can not passed to STAR
#163 opened - 0
allow underscores instead of spaces
#162 opened - 0
- 0
- 0
- 1
cellranger count error
#158 opened - 0
- 1
cellranger vdj run error
#156 opened - 4
Feature MEX file output incorrect
#155 opened - 1
Is gex_possorted_bam.bam deduplicated ?
#154 opened - 1
Filtering out unspliced UMIs
#153 opened - 0
- 0
- 0
'multi' barcode mismatch issue
#150 opened - 0
- 4
- 2
- 1
Circular chromosomes?
#146 opened - 3
- 2
- 1
- 3
- 2
Intercepting non optical duplicate from BAM file
#141 opened - 1
Rerun `cellranger multi` with different parameters without having to rerun the full alignment ?
#140 opened - 6
Cellranger count error:Your reference doesn't appear to be indexed. Please run the mkreference tool
#139 opened - 0
Similar Clones between samples
#138 opened - 2
- 1
dnase peaks information
#136 opened - 6
- 1
- 6
cellranger-arc mkref error with ensembl gtf
#133 opened - 1
How long does mkref run?
#132 opened - 3
- 3
- 1
- 0
Count indexed reference error
#128 opened - 4
- 1