Pinned Repositories
16s-qiime2
Analysis of microbiome samples in CWL using QIIME2
16S_rRNA_bacterial_communities_analysis
The set of scripts for programming language R for analyzing genetic and taxonomic diversity of bacterial communities received by metagenomic data of 16S rRNA
A-microbiologist-wants-to-compute
This repo collects the list of learning online resources related to microbiome computational science and tools.
adv-r
Advanced R: a book
AdvancedR
SIOB-296 Advanced R Programming
ampvis2
Tools for visualising amplicon data
An-Introduction-To-Applied-Bioinformatics
Interactive lessons in bioinformatics.
Analysis-of-community-composition
A set of scripts for analyzing the composition of a community of organisms using a package of vegan for the programming language R
analysis_of_microbiome_community_data_in_r
This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/
POGO_ML_workshop_genomics
POGO 2019 Workshop on Machine Learning and Artificial Intelligence in Biological Oceanographic Observations
AHdeRojas's Repositories
AHdeRojas/Analysis-of-community-composition
A set of scripts for analyzing the composition of a community of organisms using a package of vegan for the programming language R
AHdeRojas/F1000_workflow
AHdeRojas/Illumina_16S_pre-processing
R functions utilizing Usearch for Illumina 16S amplicon reads pre-preocessing
AHdeRojas/metagenomic_analysis
The set of tools for the analysis of metagenomic sequences
AHdeRojas/MicrobeDS
A repository for large-scale microbiome datasets, formatted for phyloseq
AHdeRojas/ruth_unifrac_workshop