Aarhus-Psychiatry-Research/psycop-common
🌲 Monorepo for the PSYCOP research project. Prediction of disease from Electronic Health Records at Aarhus University.
PythonMIT
Issues
- 0
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#1023 opened by github-actions - 0
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dev: stabilise transitive dependencies
#991 opened by MartinBernstorff - 0
container: do not require gh cli config to exist on dev container build
#990 opened by MartinBernstorff - 0
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#986 opened by github-actions - 1
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#984 opened by github-actions - 2
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#982 opened by github-actions - 2
Migrate to pandas>2
#968 opened by HLasse - 0
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#966 opened by github-actions - 2
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#959 opened by github-actions - 2
fix: update pyright
#921 opened by MartinBernstorff - 1
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#926 opened by github-actions - 1
fix: do not write data to the SQL database
#916 opened by MartinBernstorff - 0
feat: allow setting run name for loggers
#906 opened by MartinBernstorff - 0
feat: improve readability of logging
#905 opened by MartinBernstorff - 0
log optuna trial number when hyperparameter tuning
#919 opened by HLasse - 1
refactor: remove duplicate `sql_load`
#915 opened by MartinBernstorff - 0
fix: config .cfg is not being logged?
#907 opened by MartinBernstorff - 0
- 6
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feat: chunking for tsflattenerv2
#838 opened by HLasse - 1
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#878 opened by github-actions - 2
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feat: dataset description for tsflattener v2 specs
#826 opened by HLasse - 3
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feat: common eval pipeline
#844 opened by HLasse - 2
feat: log pred_df to Mlflow
#863 opened by HLasse - 2
dev: migrate ruff to .ruff.toml
#856 opened by MartinBernstorff - 2
ruff: enable unsafe fixes
#828 opened by HLasse - 2
feat: add `wandb` logger
#829 opened by MartinBernstorff - 4
- 2
feat: rename `experiment_path` to `run_path` in config
#842 opened by HLasse - 0
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feat: t2d, add full model evaluation for parsimonious model to supplementary
#833 opened by MartinBernstorff - 0
feat: add medications to t2d outcome table
#839 opened by MartinBernstorff - 0
feat: log_dataset
#847 opened by HLasse - 0
feat: t2d descriptive table by outcome
#830 opened by MartinBernstorff - 0
feat: t2d add MCC and F1 to results table
#834 opened by MartinBernstorff - 0