Aarhus-Psychiatry-Research/psycop-common
🌲 Monorepo for the PSYCOP research project. Prediction of disease from Electronic Health Records at Aarhus University.
PythonMIT
Issues
- 0
feat: t2d descriptive table by outcome
#830 opened by MartinBernstorff - 0
feat: t2d add MCC and F1 to results table
#834 opened by MartinBernstorff - 0
feat: t2d, add full model evaluation for parsimonious model to supplementary
#833 opened by MartinBernstorff - 0
feat: add `wandb` logger
#829 opened by MartinBernstorff - 0
- 0
ruff: enable unsafe fixes
#828 opened by HLasse - 0
feat: dataset description for tsflattener v2 specs
#826 opened by HLasse - 0
feat: migrate to v2 of timeseriesflattener
#823 opened by MartinBernstorff - 1
feat: feature reduction for sklearn pipeline
#803 opened by MartinBernstorff - 4
refactor: figure out how to do estimators
#805 opened by MartinBernstorff - 0
perf: sql_load, custom cache to .parquet
#817 opened by MartinBernstorff - 2
feat: horisontal concatenator
#774 opened by MartinBernstorff - 2
- 1
feat: implement callbacks
#786 opened by MartinBernstorff - 0
- 0
feat: CVD, hyperparam tune for layer 2
#789 opened by MartinBernstorff - 0
perf: slow lightgbm performance
#800 opened by MartinBernstorff - 1
- 1
Vulnerability scan failed
#802 opened by github-actions - 0
feat: add xgboost hyperparam suggester
#790 opened by MartinBernstorff - 0
refactor OptunaHyperParamOptimization to use the same training entrypoint as the single-model pipeline
#793 opened by MartinBernstorff - 0
perf: add LightGBM
#787 opened by MartinBernstorff - 0
perf: speed up model training
#785 opened by MartinBernstorff - 0
- 0
- 0
- 0
feat: t2d layerwise training
#765 opened by MartinBernstorff - 0
- 0
fix: log outcome column as string, not Index
#775 opened by MartinBernstorff - 0
exp: generate t2d feature set for level 4 x [mean, min, max, count, bool]
#762 opened by MartinBernstorff - 0
feat: log both flattened and non-flattened parameters for easier filtering in mlflow
#773 opened by MartinBernstorff - 0
- 0
dev: squash on submit
#756 opened by MartinBernstorff - 1
- 0
dev: upgrade to pydantic v2
#754 opened by MartinBernstorff - 0
- 0
- 0
- 0
feat: shorthand for constructing floatspaces
#713 opened by HLasse - 0
feat: log stack trace if runtime error
#737 opened by MartinBernstorff - 0
test validatedframe subclasses
#722 opened by sarakolding - 0
dev: update tasks.json with new herb vocab
#728 opened by MartinBernstorff - 0
- 0
feat: log .cfg files to mlflow
#723 opened by MartinBernstorff - 0
- 4
?fix: incredibly low loss after 4 epochs
#721 opened by MartinBernstorff - 0
fix: remove `PredictionTimeFilterer`
#717 opened by HLasse - 0
- 0
- 0