AceM1188

GO_fish

ImmuneArray

Scripts to parse through CGH immune array files to match between data filtered based on stringencies and unfiltered data.

ImmuneArrayUpdated

Use this one instead

longread_umi

Practice

SACOV_primer-probe_analyses

Code for local processing of multisequence alignments to count mismatches with primers and probes.

Vif-pipeline

contains scripts and the overall pipeline to merge paired-end reads, parse by UMID, filter UMID, blast and identify mutations in vif amplicons; edit as needed for HIV RT or other genes

biostar-handbook

Issue tracker for the Biostar Handbook

Flye

De novo assembler for single molecule sequencing reads using repeat graphs

Unicycler

hybrid assembly pipeline for bacterial genomes

AceM1188/GO_fish

AceM1188/ImmuneArray

Scripts to parse through CGH immune array files to match between data filtered based on stringencies and unfiltered data.

AceM1188/ImmuneArrayUpdated

Use this one instead

AceM1188/longread_umi

AceM1188/Practice

AceM1188/SACOV_primer-probe_analyses

Code for local processing of multisequence alignments to count mismatches with primers and probes.

AceM1188/Vif-pipeline

contains scripts and the overall pipeline to merge paired-end reads, parse by UMID, filter UMID, blast and identify mutations in vif amplicons; edit as needed for HIV RT or other genes