AdamCSmithCWS

BBS_iCAR_route_trends

bbsBayes_Intro_Workshop

CloudComputingbbsBayes

simple script and cluster configuration file to help run bbsBayes in Microsoft Azure cloud

CWS_2022_BBS_Analyses

Full workflow to recreate the 2022 BBS analyses

CWS_BBS_2021_Analyses

Documentation of the methods used to analyse the BBS for the 2021 data-release

Estimating_Change_in_NorthAmerican_Birds

Estimating the change in number of birds in the North American avifauna 1970-2017. Rosenberg et al. 2019

Route-level_BBS_trends

repo for development of spatially explicit BBS route trend models

Smith_Edwards_GAM_BBS

Full code and models for paper describing a hierarchical Bayesian GAM for the BBS

Spatial_Hierarchical_Trend_Models

Spatially explicit models for long-term monitoring data of birds in North America

bbsBayes2

An R Package for Hierarchical Bayesian Analysis of North American Breeding Bird Survey Data (second iteration)

AdamCSmithCWS/Estimating_Change_in_NorthAmerican_Birds

Estimating the change in number of birds in the North American avifauna 1970-2017. Rosenberg et al. 2019

AdamCSmithCWS/BBS_eBird_compare

sandbox fo comparing trends between BBS and eBird

AdamCSmithCWS/Route-level_BBS_trends

repo for development of spatially explicit BBS route trend models

AdamCSmithCWS/CWS_2022_BBS_Analyses

Full workflow to recreate the 2022 BBS analyses

AdamCSmithCWS/Spatial_Hierarchical_Trend_Models

Spatially explicit models for long-term monitoring data of birds in North America

AdamCSmithCWS/ACAD_summary

Summarizing and plotting the Avian Conservation Assessment Database (ACAD) species assessment results

AdamCSmithCWS/AdamCSmithCWS.github.io

My website

AdamCSmithCWS/bbs-point-level

AdamCSmithCWS/Bird_generation_times

reconciling generation times and taxonomic names

AdamCSmithCWS/birdtrends

This package provides a flexible framework to generate trends (historic or projected), based on actual or modeled annual indices data.

AdamCSmithCWS/CONW_trends

Estimating population trends for Connecticut Warbler

AdamCSmithCWS/correlated_effect_model

AdamCSmithCWS/CWS_National_Harvest_Survey

AdamCSmithCWS/Genetic_rescue_meta

meta analysis of the genetic rescue on heterozygosity and fitness

AdamCSmithCWS/HRE_testing

testing of a parallel application of BBS analyses in linux vm

AdamCSmithCWS/Interim_Goals_Framework

AdamCSmithCWS/Jefferys_etal

covariates on trends for Rufous Hummingbird

AdamCSmithCWS/MEE-IMBCR-BBS-eBird-data-integration

Code and data used in the paper entitled "Integrating counts from rigorous surveys and participatory science to better understand spatiotemporal variation in population processes" published in Methods in Ecology and Evolution

AdamCSmithCWS/monitoring_coverage

Estimating the annual population coverage of long-term monitoring programs

AdamCSmithCWS/multispecies-qpad-detectability

Estimating detectability of North American landbirds by accounting for phylogenetics and traits in a Bayesian multi-species model

AdamCSmithCWS/nest_survival_repo

Directed studies course: bayesian stats: nest survival project

AdamCSmithCWS/Ottawa_Bird_Count

AdamCSmithCWS/phylo_func_trends

Using phylogenetic and functional relationships to inform nonlinear trend estimates from long-term biodiversity data

AdamCSmithCWS/PIF_population_estimates

AdamCSmithCWS/Route_level_BBS_data

simple script to extract route-level BBS data with appropriate zeros

AdamCSmithCWS/State_of_Canadas_Birds

Summary analyses for composite species indicators

AdamCSmithCWS/SurveyCoverage

Simple Package to calculate species range coverage of monitoring programs

AdamCSmithCWS/temp_example_repo

AdamCSmithCWS/uncertainty-vis-course

AdamCSmithCWS/Wetland_bird_trends_moisture