Adrianapip

Adrianapip's Stars

• broadinstitute/viral-ngs

  Viral genomics analysis pipelines

  Language:Python18767

• fastai/fastpages

  An easy to use blogging platform, with enhanced support for Jupyter Notebooks.

  Language:Jupyter Notebook3.5k756

• midas-network/COVID-19

  2019 novel coronavirus repository

  Language:TeX633204

• cmrivers/ebola

  Data for the 2014 ebola outbeak in West Africa

  Language:PHP264144

• nglviewer/nglview

  Jupyter widget to interactively view molecular structures and trajectories

  Language:Jupyter Notebook800133

• plotly/dash-bio

  Open-source bioinformatics components for Dash

  Language:Python529195

• JosephLai241/URS

  Universal Reddit Scraper - A comprehensive Reddit scraping/archival command-line tool.

  Language:Python769104

• BenLangmead/comp-genomics-class

  Code and examples for JHU Computational Genomics class

  Language:Jupyter Notebook288112

• PacktPublishing/Bioinformatics-with-Python-Cookbook-Second-Edition

  Bioinformatics with Python Cookbook Second Edition, published by Packt

  Language:OpenEdge ABL300193

• wagtail/wagtail

  A Django content management system focused on flexibility and user experience

  Language:Python17.8k3.8k

• springload/awesome-wagtail

  A curated list of awesome packages, articles, and other cool resources from the Wagtail community.

  2k185

• brewsci/homebrew-bio

  :beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

  Language:Ruby301120

• burnash/gspread

  Google Sheets Python API

  Language:Python7k942

• xdanaux/moderncv

  A modern curriculum vitae class for LaTeX

  Language:TeX1.8k551

• getpelican/pelican-plugins

  Collection of plugins for the Pelican static site generator

  Language:Python1.4k849

• ncbi/sra-tools

  SRA Tools

  Language:C1.1k243

• kblin/ncbi-acc-download

  Download files from NCBI Entrez by accession

  Language:Python1058

• kjolley/BIGSdb

  Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.

  Language:Perl5619

• r78v10a07/trans-annot-notebook

  Language:C++21

• vsbuffalo/bds-files

  Supplementary files for my book, "Bioinformatics Data Skills"

  Language:Python598356

• lh3/readfq

  Fast multi-line FASTA/Q reader in several programming languages

  Language:C17059

• lh3/minimap2

  A versatile pairwise aligner for genomic and spliced nucleotide sequences

  Language:C1.8k405

• kmhernan/awesome-bioinformatics-formats

  Curated list of bioinformatics formats and publications

  524

• Phelimb/BIGSI

  BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data

  Language:Python12313

• VGP/vgp-assembly

  VGP repository for the genome assembly working group

  Language:Shell18551

• sindresorhus/awesome

  😎 Awesome lists about all kinds of interesting topics

  321k27.6k

• ericalli/static-site-boilerplate

  A better workflow for building modern static websites.

  Language:JavaScript1.7k165

• scikit-bio/scikit-bio

  scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

  Language:Python877267

• mbourgey/Concordia_Workshop_Biopython

  Pratical to learn basic Biopython usage

  Language:Clarion147

• samtools/samtools

  Tools (written in C using htslib) for manipulating next-generation sequencing data

  Language:C1.6k576