AlexTISYoung/snipar

Issues

• Issue with Calculated Scores and Effects in snipar

  #31 opened a year ago by PandaPowell
  7

• Memory Allocation Error in impute.py

  #29 opened a year ago by AnnabelPerry
  4

• KeyError: 'InfType' in impute.py

  #28 opened a year ago by AnnabelPerry
  3

• ibd.py genetic map errors

  #27 opened a year ago by AnnabelPerry
  4

• IndexError: index 3 is out of bounds for axis 2 with size 3

  #26 opened 2 years ago by GiulioCentorame
  2

• Installing on M1 Macbook Pro

  #17 opened 2 years ago by michaelbennett99
  1

• Error：Less than 50% of SNPs have genetic positions in genetic map file

  #24 opened 2 years ago by sherryfan030
  3

• Include source distribution in PyPi

  #23 opened 2 years ago by GiulioCentorame
  1

• Imputing missing parental genotype

  #22 opened 2 years ago by jtahir
  3

• Inspecting (possibly best-call) imputed parental genotypes?

  #15 opened 3 years ago by sjoerdvanalten
  2

• hap.kin0 not found

  #14 opened 3 years ago by sjoerdvanalten
  2

• Input file formats for impute_runner.py

  #6 opened 4 years ago by ccrobertson
  3

• Runtime estimates for imputation step?

  #7 opened 4 years ago by ccrobertson
  2

• negative imputed genotype

  #8 opened 4 years ago by yystat
  2

• Effective sample size not found in GWAS output

  #5 opened 4 years ago by yystat
  8

• AttributeError: 'NoneType' object has no attribute 'dumps' when running impute_runner.py

  #2 opened 4 years ago by yystat
  11

• Singular matrix Error when running fGWAS.py

  #4 opened 4 years ago by yystat
  3

• IndexError in fGWAS.py when the number of SNPs in observed bim files not equal to the number in imputed data

  #3 opened 4 years ago by yystat
  4

• Warning message of "count_A1" was not set

  #1 opened 4 years ago by yystat
  2