AnnaChristina

Pinned Repositories

• workshop-spatial

  Language:Jupyter Notebook1012019

• scanpy

  Single-cell analysis in Python. Scales to >100M cells.

  Language:Python2k471.8k615

• squidpy

  Spatial Single Cell Analysis in Python

  Language:Python4751154793

• squidpy_notebooks

  Tutorials for Squidpy

  Language:Jupyter Notebook3023619

• ncem

  Learning cell communication from spatial graphs of cells

  Language:Python10853713

• ncem_benchmarks

  Language:Jupyter Notebook8462

• ncem_tutorials

  Language:Jupyter Notebook13480

• nicheformer

  Repository for Nicheformer: a foundation model for single-cell and spatial omics

  Language:Jupyter Notebook835216

• single-cell-best-practices

  https://www.sc-best-practices.org

  Language:Jupyter Notebook86417208206

• spatial_scog_workshop_2022

  Tutorials for the SCOG Virtual Workshop ‘Spatial transcriptomics data analysis in Python’ - May 23-24, 2022

  Language:Jupyter Notebook539026

AnnaChristina's Repositories