BD2KGenomics/cgcloud

Issues

• Handle CVE-2018-7750

  #265 opened 6 years ago by hannes-ucsc
  0

• cgcloud create -IT toil-box issue

  #260 opened 7 years ago by niko-balanis
  5

• Move spot market zone choosing code into cgcloud lib

  #248 opened 7 years ago by cket
  1

• ADAM spark box creation error

  #263 opened 7 years ago by omkar11589
  0

• add support for aws x1 instances

  #261 opened 7 years ago by ryanking
  0

• Install maven into cgcloud-jenkins

  #255 opened 8 years ago by fnothaft
  0

• Retry RateExceeded errors with exponential backoff

  #252 opened 8 years ago by cket
  0

• Bring toil-box toil version up to date

  #251 opened 8 years ago by glennhickey
  0

• UnknownHostException: Name or service not known in spark-shell with spark-box

  #250 opened 8 years ago by heuermh
  1

• Problem with Spark slaves connection

  #235 opened 8 years ago by hyviquel
  3

• Upper case letters in namespace break assertion in security group setup

  #245 opened 8 years ago by jpdna
  8

• Retry predicate raises secondary exception if primary exception lacks `code` attribute

  #246 opened 8 years ago by hannes-ucsc
  0

• Move cgcloud-spark to Spark 1.6.1, Java 8

  #231 opened 8 years ago by fnothaft
  4

• Problem with Spark monitoring

  #236 opened 8 years ago by hyviquel
  2

• Bump Toil on toil-latest-box to Toil 3.5.0 pre releases

  #239 opened 8 years ago by hannes-ucsc
  0

• Add `toil rsync-cluster`

  #243 opened 8 years ago by hannes-ucsc
  0

• Move rewritten CGCloud-lib code back into CGCloud

  #237 opened 8 years ago by cket
  0

• cgcloud register-key error

  #234 opened 8 years ago by jpdna
  1

• Bump toil-box to 3.3.3

  #225 opened 8 years ago by hannes-ucsc
  0

• Allow toil-jenkins-slave to pass any role

  #227 opened 8 years ago by hannes-ucsc
  0

• Bump Toil to 3.3.1

  #221 opened 8 years ago by hannes-ucsc
  0

• Workflow directories are not cleaned up

  #224 opened 8 years ago by hannes-ucsc
  1

• Tests and reset-security command leak IAM roles and instance profiles

  #219 opened 8 years ago by hannes-ucsc
  0

• Create appliance-based provisioner for Google Compute

  #218 opened 8 years ago by hannes-ucsc
  1

• Handle 503 error for EC2 IAM role requests

  #217 opened 8 years ago by cket
  0

• cgcloud register-key fails because . . . I am not sure why

  #216 opened 8 years ago by mdperry
  1

• grow-cluster / create-cluster shouldn't return until finished initializing

  #210 opened 8 years ago by jvivian
  3

• cgcloud register-key doesn't work with region us-east

  #215 opened 8 years ago by kkdang
  2

• Mesos/Toil slaves not offered with preemptable attribute

  #213 opened 8 years ago by hannes-ucsc
  0

• Add cromwell to cgcloud image for cgl-docker-lib build

  #212 opened 8 years ago by fnothaft
  0

• ssh-cluster unable to sudo pip install

  #211 opened 8 years ago by dyollluap
  2

• Enable toil-leader to spawn worker instances

  #208 opened 8 years ago by hannes-ucsc
  0

• s3am is not pinned on toil-box

  #206 opened 8 years ago by hannes-ucsc
  0

• Enable toil-jenkins-slave to launch instances

  #203 opened 8 years ago by hannes-ucsc
  0

• Leaves of the box hierarchy can overflow the 64 char limit for role names

  #204 opened 8 years ago by hannes-ucsc
  0

• "make -k develop" fails occasionally

  #199 opened 8 years ago by hannes-ucsc
  0

• Bump Toil version on master and 1.5.x to 3.3.0 once released

  #201 opened 8 years ago by hannes-ucsc
  0

• Encryption parameters should not be stored in config

  #198 opened 8 years ago by hannes-ucsc
  1

• conftest.py not found during pip install

  #196 opened 9 years ago by hannes-ucsc
  0

• Ephemeral volumes aren't raided in all cases

  #194 opened 9 years ago by hannes-ucsc
  2

• Port parallel test runner from Toil

  #178 opened 9 years ago by hannes-ucsc
  0

• Bump ToilBox to Toil 3.2.0

  #192 opened 9 years ago by hannes-ucsc
  1

• Backup jenkins-master instance

  #187 opened 9 years ago by hannes-ucsc
  1

• Bump toil-box to Toil 3.1.6

  #185 opened 9 years ago by hannes-ucsc
  0

• Force useEphemeralDevices to true for all Jenkins slave boxes

  #186 opened 9 years ago by hannes-ucsc
  0

• Set useEphemeralDevices when registering Jenkins slaves

  #184 opened 9 years ago by hannes-ucsc
  1

• Add Dockstore CLI and dependencies to a CGCloud created VM

  #191 opened 9 years ago by briandoconnor
  1

• A few misc fixes for Spark/Toil testing

  #189 opened 9 years ago by fnothaft
  2

• create-cluster --spot-tentative produces stacktrace

  #182 opened 9 years ago by hannes-ucsc
  4

• Master build doesn't invoke pypi target

  #180 opened 9 years ago by hannes-ucsc
  0