Bioconductor/bioconductor.org

GitHub actions and styler suggestions

Opened this issue · 1 comments

lcolladotor commented

Hi,

Based on my recent work for r-lib/actions#84, I want to make a few small PRs to the BioC website. The feasibility of the PRs for the Bioc website also depend on r-lib/usethis#1108, r-lib/styler#636 and Bioconductor/BiocCheck#57.

Assuming things go well with r-lib/actions, r-lib/usethis, r-lib/styler and Bioconductor/BiocCheck, I think that it would be useful to add a help page like https://www.bioconductor.org/help/docker/ to the Bioconductor website that illustrates how you can setup a GitHub action workflow like https://github.com/leekgroup/derfinderPlot/blob/master/.github/workflows/check-bioc.yml on your package. So one PR would involve adding such a file.

The other PR would be related to styler and is directly related to Bioconductor/BiocCheck#57. It would involve editing http://www.bioconductor.org/developers/how-to/coding-style/ to mention styler.

Best,
Leo

lshep commented

We will gladly accept PR.