Bioconductor

Software for the analysis and comprehension of high-throughput genomic data

Pinned Repositories

BBS
The Bioconductor Build System
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bioconductor.org
Source code for the Bioconductor website
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bioconductor_docker
Docker Containers for Bioconductor
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BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
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BiocWorkshops
:warning: 2018 :warning: Bioconductor Workshops
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Contributions
Contribute Packages to Bioconductor
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CSAMA
Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
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GenomicDataCommons
Provide R access to the NCI Genomic Data Commons portal.
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LearnBioconductor
Training material for introductory R / Bioconductor courses
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pkgrevdocs
Training Material for Community Reviewers
Language:TeX9 10 4919

Bioconductor's Repositories

Bioconductor/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
Language:R130 14 65115
Bioconductor/GenomicDataCommons
Provide R access to the NCI Genomic Data Commons portal.
Language:R89 17 10524
Bioconductor/bioconductor_docker
Docker Containers for Bioconductor
Language:Dockerfile82 17 5231
Bioconductor/BiocManager
CRAN Package For Managing Bioconductor Packages
Language:R75 15 13825
Bioconductor/basilisk
Clone of the Bioconductor repository for the basilisk package.
Language:R27 7 3415
Bioconductor/bioconductor.org
Source code for the Bioconductor website
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Bioconductor/HDF5Array
HDF5 datasets as array-like objects in R
Language:R12 18 5414
Bioconductor/bioc-run
Helper script for bioconductor/bioconductor_docker
Language:Shell11 3 165
Bioconductor/SparseArray
High-performance sparse data representation and manipulation in R
Language:C10 13 192
Bioconductor/BBS
The Bioconductor Build System
Language:Shell9 15 22911
Bioconductor/pkgrevdocs
Training Material for Community Reviewers
Language:TeX9 10 4919
Bioconductor/graph
graph: A package to handle graph data structures
Language:R6 6 59
Bioconductor/AnnotationForge
Tools for building SQLite-based annotation data packages
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Bioconductor/BiocHowTo
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Bioconductor/hca
Human Cell Atlas data discovery and retrieval
Language:R3 8 62
Bioconductor/HubPub
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Bioconductor/Organism.dplyr
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Bioconductor/EuroBioC2025
Website of the European Bioconductor Conference 2025
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Bioconductor/GenomeInfoDbData
GenomeInfoDbData
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Bioconductor/bioconductor_salt
Salt to configure Linux and Mac (x86_64, arm64) for the BBS
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Bioconductor/BiocSlack
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Bioconductor/pwalign
Perform pairwise sequence alignments
Language:R1 9 92
Bioconductor/BiocKubeInstall
Build Bioconductor package binaries using Kubernetes on GKE or AKS
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Bioconductor/AnnotationHubData
Transform public data resources into Bioconductor Data Structures
Language:R8 36
Bioconductor/AnVILGCP
Functionality for the AnVIL platform using GCP
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Bioconductor/BiocReporting
Public repo for Bioconductor project reporting 2022
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Bioconductor/gha-build-rstudio-release-amd64
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Bioconductor/ReleaseLaunch
documentation and R scripts helpful for Bioconductor release
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Bioconductor/S4Examples
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Bioconductor/status.bioconductor.org
Status page for Bioconductor based on cstate hugo site
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