Pinned Repositories
BBS
The Bioconductor Build System
bioconductor.org
Source code for the Bioconductor website
bioconductor_docker
Docker Containers for Bioconductor
BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
BiocWorkshops
:warning: 2018 :warning: Bioconductor Workshops
Contributions
Contribute Packages to Bioconductor
CSAMA
Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
GenomicDataCommons
Provide R access to the NCI Genomic Data Commons portal.
LearnBioconductor
Training material for introductory R / Bioconductor courses
pkgrevdocs
Training Material for Community Reviewers
Bioconductor's Repositories
Bioconductor/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
Bioconductor/bioconductor_docker
Docker Containers for Bioconductor
Bioconductor/GenomicRanges
Representation and manipulation of genomic intervals
Bioconductor/bioconductor-training
Bioconductor teaching and education committee
Bioconductor/GenomeInfoDb
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
Bioconductor/Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Bioconductor/DelayedArray
A unified framework for working transparently with on-disk and in-memory array-like datasets
Bioconductor/bioconductor.org
Source code for the Bioconductor website
Bioconductor/IRanges
Foundation of integer range manipulation in Bioconductor
Bioconductor/S4Vectors
Foundation of vector-like and list-like containers in Bioconductor
Bioconductor/BiocGenerics
Defines many S4 generic functions used in Bioconductor
Bioconductor/Rhtslib
HTSlib high-throughput sequencing library as an R package
Bioconductor/BBS
The Bioconductor Build System
Bioconductor/biocblog
A Quarto blog for Bioconductor community
Bioconductor/AnVIL
Interact with AnVIL and Leonardo projects
Bioconductor/BiocWorkingGroups
Bioconductor working group guidelines. Also, a list of active, suggested, and inactive working groups for bioconductor for the community to volunteer to be apart of. The community is also welcome to suggest new working groups.
Bioconductor/pkgrevdocs
Training Material for Community Reviewers
Bioconductor/SparseArray
High-performance sparse data representation and manipulation in R
Bioconductor/biocViews
Categorized views of R package repositories
Bioconductor/RaggedExperiment
Matrix-like representations of mutation and CN data
Bioconductor/BiocClassesWorkingGroup
Notes and Discussion concerning recommended classes for Bioconductor
Bioconductor/EuroBioC2025
Website of the European Bioconductor Conference 2025
Bioconductor/txdbmaker
A set of tools for making TxDb objects from genomic annotations from various sources (e.g. UCSC, Ensembl, and GFF files)
Bioconductor/bio-web-stats
Code base for replacement of stats.bioconductor.org (download_stats)
Bioconductor/BiocIO
Standard input / output framework for use by Bioconductor packages
Bioconductor/bioconductor_salt
Salt to configure Linux and Mac (x86_64, arm64) for the BBS
Bioconductor/BiocSlack
Bioconductor/auto-archive-release
Ansible playbook to archive a release using rsync and rclone via a VM
Bioconductor/code.bioconductor.org
Tools for browsing and searching the code behind Bioconductor packages
Bioconductor/status.bioconductor.org
Status page for Bioconductor based on cstate hugo site