Bioconductor/BiocWorkshops

Issues

• Lazy representation of very large genomic resources in R/Bioconductor

  #67 opened 6 years ago by Liubuntu
  1

• Cloud-scale genomic data science with Bioconductor

  #66 opened 6 years ago by vjcitn
  0

• Workflow for Multi-omics Analysis with MultiAssayExperiment and curatedTCGAData

  #65 opened 6 years ago by lwaldron
  0

• error in epub version

  #53 opened 6 years ago by lwaldron
  4

• Text runs off page in pdf

  #60 opened 6 years ago by seandavi
  1

• `isa` package is no longer available

  #58 opened 6 years ago by seandavi
  1

• Small manuscript describing process of developing workshop materials and book

  #61 opened 6 years ago by seandavi
  0

• RCy3 connection issues from amazon instance

  #47 opened 6 years ago by risserlin
  12

• Please add me as a contributor

  #63 opened 6 years ago by kevinrue
  1

• Licensing of all material

  #49 opened 6 years ago by seandavi
  7

• Figures too large in pdf

  #59 opened 6 years ago by seandavi
  1

• text and figures run off page in PDF version

  #52 opened 6 years ago by lwaldron
  3

• Publish book on bookdown.org?

  #48 opened 6 years ago by sa-lee
  5

• Move to docker for portability--for next iteration

  #57 opened 6 years ago by seandavi
  0

• Update process

  #56 opened 6 years ago by seandavi
  3

• Anyone averse to adding a zenodo DOI for the repository?

  #55 opened 6 years ago by seandavi
  0

• In future, consider using git submodules for chapters

  #54 opened 6 years ago by seandavi
  0

• Using a single chapter?

  #51 opened 6 years ago by mtmorgan
  1

• Instructions for using the materials

  #50 opened 6 years ago by lwaldron
  2

• Citations not displayed properly

  #39 opened 6 years ago by sa-lee
  4

• Including data from a non-Bioc package

  #16 opened 6 years ago by lawremi
  6

• Turaga_MaintainBioc.Rmd

  #35 opened 6 years ago by lwaldron
  0

• Law_RNAseq123.Rmd

  #29 opened 6 years ago by lwaldron
  4

• Safikhani_Pharmacogenomics.Rmd

  #34 opened 6 years ago by lwaldron
  12

• Ramos_MultiAssayExperiment.Rmd

  #33 opened 6 years ago by lwaldron
  6

• MacDonald_Annotation.Rmd

  #32 opened 6 years ago by lwaldron
  11

• Lee_Plyranges.Rmd

  #31 opened 6 years ago by lwaldron
  9

• Lawrence_GenomicRanges.Rmd

  #30 opened 6 years ago by lwaldron
  8

• 230_Isserlin_RCy3_intro.Rmd

  #28 opened 6 years ago by lwaldron
  7

• Geistlinger_Omics.Rmd

  #27 opened 6 years ago by lwaldron
  0

• Cooley_DECIPHER.Rmd

  #26 opened 6 years ago by lwaldron
  23

• 500_Effectively_Using_the_DelayedArray_Framework.Rmd

  #24 opened 6 years ago by lwaldron
  10

• 201_Love_DESeq2.Rmd

  #21 opened 6 years ago by lwaldron
  2

• Waldron_PublicData.Rmd

  #36 opened 6 years ago by lwaldron
  15

• 100_Morgan_RBiocForAll

  #40 opened 6 years ago by mtmorgan
  0

• Bookdown PDF

  #45 opened 6 years ago by lwaldron
  6

• 220_Das_SingleCellRNASeq.Rmd

  #22 opened 6 years ago by lwaldron
  20

• Add Google Analytics tracking

  #44 opened 6 years ago by seandavi
  1

• Per-chapter references?

  #43 opened 6 years ago by seandavi
  4

• Coetzee_StatePaintR.Rmd

  #25 opened 6 years ago by lwaldron
  3

• PDF of 500_Effectively_Using_the_DelayedArray_Framework.Rmd

  #42 opened 6 years ago by seandavi
  0

• Parallel builds--idea for next year

  #41 opened 6 years ago by seandavi
  1

• Incomplete or Erroring Workshops

  #19 opened 6 years ago by LiNk-NY
  5

• Please add me as a contributor

  #38 opened 6 years ago by jmacdon
  1

• Please add me as a collaborator

  #37 opened 6 years ago by diyadas
  1

• 230_Isserlin_RCy3_intro.Rmd

  #23 opened 6 years ago by lwaldron
  1

• Using package hosted on github for helper code

  #20 opened 6 years ago by p-smirnov
  2

• Please add me as a collaborator

  #18 opened 6 years ago by kstreet13
  1

• Please add me as a collaborator.

  #15 opened 6 years ago by zhaleh-safikhani
  1

• Please add me as a collaborator

  #17 opened 6 years ago by Simon-Coetzee
  1