BlueBrain/BlueCelluLab

Issues

• add neuroglia synapses in bluecellulab

  #150 opened 6 months ago by sfarina05
  1

• [BGLPY-52] create progress bar for instantiate_gids(gids,synapse_detail=2)

  #189 opened 3 months ago by anilbey
  1

• Feature request: ability to check for node sets in the simulation node sets file

  #186 opened 3 months ago by joni-herttuainen
  0

• Bug: `matplotlib>=3.9` - module 'matplotlib.cm' has no attribute 'get_cmap'

  #183 opened 3 months ago by joni-herttuainen
  2

• Isolate NEURON Simulations in Separate Processes

  #73 opened 4 months ago by anilbey
  2

• StimulusFactory: enable amplitude based versions of the protocols

  #180 opened 4 months ago by anilbey
  2

• Warning needed on serialised sections?

  #176 opened 4 months ago by arnaudon
  3

• Allow custom section names in hoc files for Cell object

  #140 opened 5 months ago by darshanmandge
  3

• bug when morphology is not in a subfolder

  #166 opened 5 months ago by AurelienJaquier
  0

• core::Cell::re_init_rng does not take myelin section type into account

  #94 opened 5 months ago by anilbey
  2

• celsius and v_init can be defined by neuron or within the template, enable it

  #153 opened 5 months ago by anilbey
  3

• Address multiple neuron references pointing to same recording

  #152 opened 6 months ago by anilbey
  0

• simplify RNGSettings logic for setting the seeds

  #87 opened 6 months ago by anilbey
  1

• Add missing unit tests for tools functions

  #76 opened 6 months ago by anilbey
  1

• add unit tests for bluecellulab/tools.py using sonata simulations

  #17 opened 6 months ago by anilbey
  1

• Function cell.get_psection not working

  #128 opened 6 months ago by stefanoantonel
  4

• during import, some neuron function returns 1 check if it is something important

  #4 opened 6 months ago by anilbey
  8

• map SONATA spec's LINEAR input

  #144 opened 6 months ago by anilbey
  0

• Run a profiler to detect performance bottlenecks

  #143 opened 6 months ago by anilbey
  0

• logging info in importer

  #136 opened 6 months ago by arnaudon
  5

• stimulus duration of add_noise_step is longer than informed

  #138 opened 6 months ago by AurelienJaquier
  0

• bug in the assignment of AIS_scaler/soma_scaler

  #117 opened 7 months ago by anilbey
  0

• use public_hoc_cell instead of accessing getCell in core.py

  #129 opened 7 months ago by darshanmandge
  1

• Support hoc templates that load morphologies with .h5 extension

  #131 opened 7 months ago by anilbey
  0

• Add default segx to add_voltage_recording

  #126 opened 7 months ago by stefanoantonel
  0

• Discrepancy in Synapse-Replay Simulation Outputs between Neurodamus and BlueCelluLab

  #75 opened a year ago by dhuruvapriyan
  11

• switch to pydantic2.0

  #56 opened 9 months ago by anilbey
  0

• drop py37 support

  #3 opened 9 months ago by anilbey
  1

• Use logging?

  #107 opened 9 months ago by arnaudon
  3

• Issue with Synaptic and Somatic Voltage traces using synapse_replay feature

  #99 opened 10 months ago by dhuruvapriyan
  9

• replace neuron.h.nrn_load_dll call with the high level load_mechanisms function

  #20 opened a year ago by anilbey
  0

• decouple init_callbacks & weight_updates from plotting

  #89 opened a year ago by anilbey
  0

• Issues while initializing Excitatory Plastic cells

  #84 opened a year ago by dhuruvapriyan
  16

• Add unit test for EuclideanSectionDistance

  #88 opened a year ago by anilbey
  1

• core::Cell::initialize_synapses is not supporting GluSynapse synapse type

  #80 opened a year ago by anilbey
  0

• Use of ramp protocol for the calculation of steady state voltage

  #77 opened a year ago by anilbey
  1

• Discrepancy in Results Between Neurodamus and BlueCelluLab on Zenodo SSCX Circuit

  #72 opened a year ago by anilbey
  1

• Have an alternative template naming

  #6 opened a year ago by anilbey
  0

• use sonata terminology in the API

  #59 opened a year ago by anilbey
  0

• SSim API needs simplifications

  #57 opened a year ago by anilbey
  0

• having consistent sampling options across ssim methods

  #44 opened a year ago by anilbey
  0

• First doc page should be readme

  #48 opened a year ago by wvangeit
  0

• add unit test for get_allsections_voltagerecordings

  #15 opened a year ago by anilbey
  0

• use the built-in logging module

  #19 opened a year ago by anilbey
  1

• BUG: template_format has None as default. It should be a str however

  #10 opened a year ago by anilbey
  1