neuron

There are 232 repositories under neuron topic.

  • neuronsimulator/nrn

    NEURON Simulator

    Language:C++479221.2k128

  • AllenInstitute/bmtk

    Brain Modeling Toolkit

    Language:Python3052311495

  • ArtemKirsanov/BlenderSpike

    A Blender add-on to bring animations from NEURON

    Language:Python1907429

  • BlueBrain/CoreNeuron

    Simulator optimized for large scale neural network simulations.

    Language:C++1412024241

  • swharden/pyABF

    pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

    Language:Jupyter Notebook1121611535

  • srid/neuron-template

    A template to get started with neuron

    Language:Markdown862720

  • natverse/nat

    NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

    Language:R731738627

  • srogatch/ProbQA

    Probabilistic question-asking system: the program asks, the users answer. The minimal goal of the program is to identify what the user needs (a target), even if the user is not aware of the existence of such a thing/product/service.

    Language:C++73618

  • RivuletStudio/rivuletpy

    Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

    Language:Python7162019
  • awesome-computational-neuro-science

    realamirhe/awesome-computational-neuro-science

    A curated list of awesome cns frameworks, libraries, and software + First class pure python Tutorial Series for Spiking Neural Networks 🔥

    Language:Jupyter Notebook671311
  • BioExplorer

    BlueBrain/BioExplorer

    The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

    Language:C++662211

  • ContextLab/computational-neuroscience

    Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

    Language:TeX492311

  • MediaTek-NeuroPilot/tflite-neuron-delegate

    MediaTek's TFLite delegate

    Language:C++48497

  • sg-s/xolotl

    A MATLAB neuron simulator. Very fast (written in C++). Flexible (fully object oriented). Immediate (live manipulation in MATLAB). Comes with a powerful parameter optimizer. Get started ➡️

    Language:C++4634538

  • ProjectPyRhO/PyRhO

    A virtual optogenetics laboratory

    Language:Python39139

  • orena1/NEURON_tutorial

    Tutorial for understanding how to use NEURON simulation environment

    Language:AGS Script342210

  • Jumaruba/SNN

    This is a repository with implementations of neuron models, synapses, and spiking neural networks (SNN). It's still in development and it has original content in terms of code.

    Language:Python32267

  • BlueBrain/Ultraliser

    Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.

    Language:C++314575

  • BlueBrain/MorphIO

    A python and C++ library for reading and writing neuronal morphologies

    Language:C++281113624

  • HuuYuLong/Complementary-LIF

    Offical Implementation of "CLIF: Complementary Leaky Integrate-and-Fire Neuron for Spiking Neural Networks" (ICML 2024 spotlight)

    Language:Python25171

  • navis-org/pymaid

    Python library to interface with CATMAID servers. Fully interoperable with navis.

    Language:Python2459211

  • pyrho/nerveux.nvim

    A neovim plugin written in lua to interact with the neuron Zettelkasten software.

    Language:Lua24163

  • carboncopies/BrainGenix-NES

    [Mirror of https://gitlab.braingenix.org/carboncopies/] BrainGenix-NES is a cutting-edge simulation platform for whole brain emulation research and development that supports digitally replicating both form and function of brain tissue. Developed by the Carboncopies Foundation's BrainGenix initiative, it complements the Virtual Brain Platform (VBP).

    Language:C++206205

  • PavlidisLab/neuroexpresso

    :bar_chart: Gene expression in neuroexpresso database

    Language:R185441

  • MetaCell/NEURON-UI

    NEURON User Interface

    Language:AMPL171495
  • Innervator

    Thraetaona/Innervator

    Innervator: Hardware Acceleration for Neural Networks

    Language:VHDL17102

  • aca/neuron-language-server

    Language server implementation for neuron

    Language:Go167131

  • CSDLLab/PyNeval

    PyNeval, a toolbox for quantative analysis on neuron reconstruction result.

    Language:Python16452

  • Merterm/BRAIN-M

    Brilliantly Radical Artificially Intelligent Neural Machine

    Language:Verilog16222

  • JuliaSzymanska/Artificial-Intelligence

    Implementing Artificial Neural Network training process in Python

    Language:Python15102

  • shohan-pherones/snake-game-self-played

    This is a self-played snake game that uses genetic algorithm and neural network to learn and improve its gameplay over time. The game is built using the p5.js library for graphics and user interface, and the tensorflow.js and neataptic libraries for machine learning.

    Language:JavaScript15100

  • BlueBrain/BlueCelluLab

    Biologically detailed neural network simulations and analysis API

    Language:Python1464815

  • zer0int/CLIP-ViT-visualization

    What do CLIP Vision Transformers learn? Feature Visualization can show you!

    Language:Python14111

  • cudmore/SanPy

    SanPy is software for whole-cell current clamp analysis.

    Language:Python13175

  • obophenotype/brain_data_standards_ontologies

    A repository for co-ordinating work on ontologies for the Brain Data Standards Project

    Language:Python1261963

  • Okerew/Neural-Web

    This repository shows an alternative neural network structure to modern ones, inspiring from the brain and it's creativity, workings.

    Language:C++12201