natverse/nat

Issues

• bug in get_distance_to_soma

  #509 opened 3 months ago by dokato
  1

• Compatibility with igraph 2.0.0

  #517 opened 3 months ago by krlmlr
  20

• plotly wire3d() no longer working after upgrading from nat 1.8.22 to 1.10.4

  #513 opened a year ago by Jsalas424
  2

• nat::wire3d is plotting polygons when there should only be triangles - not a problem with rgl::wire3d

  #511 opened 2 years ago by Jsalas424
  0

• Can't recreate the example on the reference site of nat: NeuroAnatomy Toolbox for wire frame plots

  #510 opened 2 years ago by Jsalas424
  3

• fix bug in matching by first column

  #503 opened 2 years ago by jefferis
  0

• consider adding a `nid()` function to handle numeric ids

  #505 opened 2 years ago by jefferis
  0

• nlapply to include metadata from data.frame

  #500 opened 3 years ago by dokato
  0

• Need to integrate as.seglist test fix in CRAN release

  #494 opened 3 years ago by jefferis
  6

• Future igraph will consider the null graph disconnected

  #491 opened 3 years ago by szhorvat
  1

• Undesired output when stitching with an empty neuronlist

  #490 opened 3 years ago by dokato
  1

• Support for units in nat

  #470 opened 4 years ago by dokato
  1

• subset neuronlist doesn't work with functions

  #489 opened 3 years ago by dokato
  3

• improve performance of simplify_neuron

  #471 opened 3 years ago by dokato
  4

• write neurons save metadata by default

  #483 opened 3 years ago by dokato
  1

• Add windows build to github actions

  #478 opened 4 years ago by jefferis
  2

• Allow xyzmatrix method to assign by rownames

  #469 opened 4 years ago by dokato
  1

• add print method for neuronlistz

  #466 opened 4 years ago by dokato
  0

• Strahler order fails on a simplified neuron with no branches

  #464 opened 4 years ago by dokato
  3

• nTrees in summary

  #461 opened 4 years ago by dokato
  1

• bug in multiplication for neuronlistz

  #457 opened 4 years ago by jefferis
  1

• Consider adding geodesic_distances function

  #434 opened 5 years ago by jefferis
  1

• pointsinside for bounding box should not require Rvcg

  #454 opened 4 years ago by jefferis
  0

• Implement support for neuroglancer visualisation

  #439 opened 5 years ago by SridharJagannathan
  3

• "pan3d()" not found

  #447 opened 4 years ago by artxz
  4

• Improve printing for multiclass neuronlist

  #446 opened 4 years ago by jefferis
  0

• Bad triangle numbers

  #445 opened 4 years ago by PostPreAndCleft
  3

• Fix test failure in R 4.1 for c.neuronlist

  #444 opened 4 years ago by jefferis
  0

• support for zip files specified by an URL that does not end in .zip

  #440 opened 4 years ago by jefferis
  1

• Better support for reading / plotting neuron meshes

  #441 opened 4 years ago by jefferis
  2

• Turn off grid lines when using plotly engine

  #427 opened 4 years ago by alexanderbates
  2

• Make neuronlistfh/remotesync downloads more robust

  #437 opened 5 years ago by jefferis
  0

• Give xform.neuronlist the option to xform all points in one go

  #436 opened 5 years ago by jefferis
  0

• optimise stitching neurons function

  #435 opened 5 years ago by SridharJagannathan
  0

• Bug in xyzmatrix for 0 row data.frames

  #433 opened 5 years ago by jefferis
  0

• improve error message for cmtk.version

  #430 opened 5 years ago by dempseyg447
  1

• Move features to nat from other packages

  #423 opened 5 years ago by SridharJagannathan
  3

• Support binary HyperSurface files in read.hxsurf

  #429 opened 5 years ago by jefferis
  0

• Remove duplicate overlap / overlap_score functions

  #426 opened 5 years ago by jefferis
  2

• as.seglist.igraph is slow

  #425 opened 5 years ago by jefferis
  0

• subset.neuron() doesn't work inside nmapply()

  #414 opened 5 years ago by kjheinz
  4

• Implement 3d- wireframe plot in plotly

  #421 opened 5 years ago by SridharJagannathan
  0

• teach dotprops.character to handle multiple input files

  #420 opened 5 years ago by jefferis
  0

• Setting fig size missing in vignette plotly.Rmd

  #417 opened 5 years ago by mmc46
  0

• xyzmatrix.mesh3d should have colnames XYZ

  #418 opened 5 years ago by jefferis
  0

• add xyzmatrix.shapelist3d method

  #419 opened 5 years ago by jefferis
  2

• Neuron: fix use of "ties" parameter in approx() call

  #416 opened 5 years ago by jefferis
  0

• scroll to zoom does not work using nopen3d()

  #413 opened 5 years ago by kjheinz
  2

• Teach write.neuron to set label column of soma when writing SWCs

  #415 opened 5 years ago by jefferis
  2

• Bug in nmapply with progress

  #412 opened 5 years ago by jefferis
  1