BonilKoo
Ph.D. candidate in bioinformatics at Seoul National University. Interested in integration of artificial intelligence, multi-omics, drug discovery.
Seoul National UniversitySeoul, Republic of Korea
BonilKoo's Stars
Ligo-Biosciences/AlphaFold3
Open source implementation of AlphaFold3
swansonk14/admet_ai
Training and prediction scripts for Chemprop models trained on ADMET datasets
chemosim-lab/ProLIF
Interaction Fingerprints for protein-ligand complexes and more
ccsb-scripps/AutoDock-Vina
AutoDock Vina
gnina/gnina
A deep learning framework for molecular docking
pb3lab/ibm3202
Google Colab Tutorials for IBM3202
junxia97/awesome-pretrain-on-molecules
[IJCAI 2023 survey track]A curated list of resources for chemical pre-trained models
rlabduke/reduce
Reduce - tool for adding and correcting hydrogens in PDB files
EDAPINENUT/CBGBench
Official code repository of CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph
XzwHan/CARD
Official PyTorch implementation for the paper "CARD: Classification and Regression Diffusion Models"
mims-harvard/PINNACLE
Contextualizing protein representations using deep learning on protein networks and single-cell data
plinder-org/plinder
Protein Ligand INteraction Dataset and Evaluation Resource
PavlidisLab/gemmapy
ML2Health/ML2ClinicalTrials
biomed-AI/DiffDec
AspirinCode/awesome-BioMolFold
RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding
AspirinCode/awesome-AI4MolConformation-MD
List of molecules (small molecules, RNA, peptide, protein, enzymes, antibody, and PPIs) conformations and molecular dynamics (force fields) using generative artificial intelligence and deep learning
gmum/huggingmolecules
evolutionaryscale/esm
baker-laboratory/rf_diffusion_all_atom
Public RFDiffusionAA repo
baker-laboratory/RoseTTAFold-All-Atom
AspirinCode/papers-for-molecular-design-using-DL
List of Molecular and Material design using Generative AI and Deep Learning
CAODH/EquiScore
Genentech/gReLU
gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
opencobra/memote
memote – the genome-scale metabolic model test suite
fhh2626/BFEE2
binding free energy estimator 2
GHeinzelmann/BAT.py
The Binding Affinity Tool (BAT.py) is a fully automated tool for absolute binding free energy calculations on protein-ligand systems, compatible with the AMBER and OpenMM simulation packages.
qkrdmsghk/GOODHSE
[CVPR 2024] Improving out-of-distribution generalization in graphs via hierarchical semantic environments
JanoschMenke/metis
Python-based GUI to collect Feedback of Chemist in Molecules
LieberInstitute/recount3
Explore and download data from the recount3 project