Pinned Repositories
ADMRE
Material used in the paper "On the accumulation of deleterious mutations during range expansions"
ExpansionLoad_Bacteria
fsc_shiny
Shiny application to facilitate the interpretation of fastsimcoal results.
originsEarlyFarmers
Code for Marchi et al. paper
pathways
polysel
Pipeline to detect polygenic selection in gene sets
sfspool
signet
An R package to detect selection in biological pathways
simpLAI
Local ancestry inference from small reference panels
vole_genome_analysis
Material for the analysis of Microtus whole genomes
CMPG - University of Bern's Repositories
CMPG/signet
An R package to detect selection in biological pathways
CMPG/polysel
Pipeline to detect polygenic selection in gene sets
CMPG/ADMRE
Material used in the paper "On the accumulation of deleterious mutations during range expansions"
CMPG/originsEarlyFarmers
Code for Marchi et al. paper
CMPG/pathways
CMPG/simpLAI
Local ancestry inference from small reference panels
CMPG/vole_genome_analysis
Material for the analysis of Microtus whole genomes
CMPG/fsc_shiny
Shiny application to facilitate the interpretation of fastsimcoal results.
CMPG/sfspool
CMPG/ExpansionLoad_Bacteria
CMPG/genomicSurfing
Scripts to simulate and analyse genomic diversity evolution during a range expansion