COG-UK

COG-UK Consortium has been created to deliver large-scale & rapid whole-genome virus sequencing to NHS centres and the UK government

Pinned Repositories

civet
Language:Python7 3 02
D614G_spike_mutation_analysis
1 5 10
datapipe
Nextflow implementation of grapevine
Language:Nextflow8 6 313
dipi-group
Data integrity and pipeline integration working group
4 11 1911
docs
Language:HTML2 2 06
geography_cleaning
Language:Python2 6 21
grapevine
Process consensus file for COG-UK data
Language:Python14 6 312
mink
Language:Python2 6 20
phylo-reports
Language:Jupyter Notebook1 8 11
UK-lineage-dynamics-analysis
Large-scale virus genome sequencing reveals the genetic structure and importation dynamics of a national COVID-19 epidemic.
Language:R4 8 71

COG-UK's Repositories

COG-UK/grapevine
Process consensus file for COG-UK data
Language:Python14 6 312
COG-UK/datapipe
Nextflow implementation of grapevine
Language:Nextflow8 6 313
COG-UK/civet
Language:Python7 3 02
COG-UK/dipi-group
Data integrity and pipeline integration working group
4 11 1911
COG-UK/UK-lineage-dynamics-analysis
Large-scale virus genome sequencing reveals the genetic structure and importation dynamics of a national COVID-19 epidemic.
Language:R4 8 71
COG-UK/docs
Language:HTML2 2 06
COG-UK/geography_cleaning
Language:Python2 6 21
COG-UK/mink
Language:Python2 6 20
COG-UK/B.1.1.7_spatial_analysis_UK
Language:Jupyter Notebook1 4 12
COG-UK/D614G_spike_mutation_analysis
1 5 10
COG-UK/Delta-analysis
Language:Jupyter Notebook1 5 11
COG-UK/phylo-reports
Language:Jupyter Notebook1 8 11
COG-UK/camb-uni-phylo
5 01
COG-UK/cog-data
5 0
COG-UK/cog-uk.github.io
2 0
COG-UK/data-working-group
Outputs from COG-UK data working group
7 0
COG-UK/travel-quarantine
Language:Python4 0
COG-UK/UK-recombination-analysis
Language:Python2 0