Pinned Repositories
BIGapp
R Shiny app to perform the bioinformatics pipelines developed within Breeding Insight
BIGr
This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data
cristi_portfolio
Portfolio
cristianetaniguti.github.io
Personal webpage with infos and work posts
onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
poly_containers
Docker images for polyploid analysis
Reads2Map
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
Reads2MapApp
Shiny app to evaluate Reads2Map workflows results
Reads2MapTools
Support package to perform mapping populations simulations and genotyping for Reads2Map workflows
viewpoly
R package to visualize genetic maps and QTL analysis.
Cristianetaniguti's Repositories
Cristianetaniguti/Reads2Map
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
Cristianetaniguti/poly_containers
Docker images for polyploid analysis
Cristianetaniguti/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
Cristianetaniguti/Reads2MapTools
Support package to perform mapping populations simulations and genotyping for Reads2Map workflows
Cristianetaniguti/Reads2MapApp
Shiny app to evaluate Reads2Map workflows results
Cristianetaniguti/BIGapp
R Shiny app to perform the bioinformatics pipelines developed within Breeding Insight
Cristianetaniguti/BIGr
This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data
Cristianetaniguti/cristi_portfolio
Portfolio
Cristianetaniguti/cristianetaniguti.github.io
Personal webpage with infos and work posts
Cristianetaniguti/cursoR
Package for didatic purpose.
Cristianetaniguti/diaQTL
QTL analysis in diallel populations
Cristianetaniguti/fullsibQTL
QTL mapping in outcrossing species using CIM
Cristianetaniguti/fullsibQTL_dev
QTL mapping in outcrossing species using CIM
Cristianetaniguti/GENt-esalq.github.io
GENt group (ESALQ/USP) website
Cristianetaniguti/Workshop_genetica_esalq
Material utilizado nos minicursos de Introdução ao R do Workshop de Férias de Genética e Melhoramento de Plantas da ESALQ
Cristianetaniguti/gvenck.github.io
GVENCK website
Cristianetaniguti/GWASpoly
GWAS software that can handle autopolyploids
Cristianetaniguti/MAPpoly
Genetic maps in autopolyploids
Cristianetaniguti/mappoly-mp
Research codes for new mappoly version
Cristianetaniguti/MrBeanApp
Web application
Cristianetaniguti/QTLpoly
R package for random-effect multiple QTL mapping in autopolyploids
Cristianetaniguti/simuscopR
Wrap-up R package for SimusCop simulations.
Cristianetaniguti/StatGenESALQ_App
Shiny App for Statistical Genetics analysis.
Cristianetaniguti/Tutorials
Store tutorials for other repositories
Cristianetaniguti/Tutorials_File
It hosts complementary files from tutorials and posts of statgen.esalq.usp.br webpage