Pinned Repositories
BIGapp
R Shiny app to perform the bioinformatics pipelines developed within Breeding Insight
BIGr
This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data
cristianetaniguti.github.io
Personal webpage with infos and work posts
cursoR
Package for didatic purpose.
onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
poly_containers
Docker images for polyploid analysis
Reads2Map
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
Reads2MapApp
Shiny app to evaluate Reads2Map workflows results
Reads2MapTools
Support package to perform mapping populations simulations and genotyping for Reads2Map workflows
viewpoly
R package to visualize genetic maps and QTL analysis.
Cristianetaniguti's Repositories
Cristianetaniguti/Reads2Map
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
Cristianetaniguti/poly_containers
Docker images for polyploid analysis
Cristianetaniguti/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
Cristianetaniguti/Reads2MapTools
Support package to perform mapping populations simulations and genotyping for Reads2Map workflows
Cristianetaniguti/Reads2MapApp
Shiny app to evaluate Reads2Map workflows results
Cristianetaniguti/BIGapp
R Shiny app to perform the bioinformatics pipelines developed within Breeding Insight
Cristianetaniguti/BIGr
This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data
Cristianetaniguti/cristianetaniguti.github.io
Personal webpage with infos and work posts
Cristianetaniguti/cursoR
Package for didatic purpose.
Cristianetaniguti/diaQTL
QTL analysis in diallel populations
Cristianetaniguti/fullsibQTL
QTL mapping in outcrossing species using CIM
Cristianetaniguti/fullsibQTL_dev
QTL mapping in outcrossing species using CIM
Cristianetaniguti/GENt-esalq.github.io
GENt group (ESALQ/USP) website
Cristianetaniguti/Workshop_genetica_esalq
Material utilizado nos minicursos de Introdução ao R do Workshop de Férias de Genética e Melhoramento de Plantas da ESALQ
Cristianetaniguti/gvenck.github.io
GVENCK website
Cristianetaniguti/MAPpoly
Genetic maps in autopolyploids
Cristianetaniguti/mappoly-mp
Research codes for new mappoly version
Cristianetaniguti/QTLpoly
R package for random-effect multiple QTL mapping in autopolyploids
Cristianetaniguti/simuscopR
Wrap-up R package for SimusCop simulations.
Cristianetaniguti/StatGenESALQ_App
Shiny App for Statistical Genetics analysis.
Cristianetaniguti/Tutorials
Store tutorials for other repositories
Cristianetaniguti/Tutorials_File
It hosts complementary files from tutorials and posts of statgen.esalq.usp.br webpage