Croydon-Brixton
PhD student at Cambridge Uni. AI x Bio x Sustainability. Enzyme design and engineering.
Cambridge Uni, Institute for Protein Design (Baker lab), ETH ZurichCambridge UK
Croydon-Brixton's Stars
ollama/ollama
Get up and running with Llama 3.3, Phi 4, Gemma 2, and other large language models.
karpathy/nanoGPT
The simplest, fastest repository for training/finetuning medium-sized GPTs.
meta-llama/llama3
The official Meta Llama 3 GitHub site
microsoft/LoRA
Code for loralib, an implementation of "LoRA: Low-Rank Adaptation of Large Language Models"
garrettj403/SciencePlots
Matplotlib styles for scientific plotting
cxli233/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
pytorch/torchtune
PyTorch native post-training library
facebookresearch/schedule_free
Schedule-Free Optimization in PyTorch
AnswerDotAI/fsdp_qlora
Training LLMs with QLoRA + FSDP
lucidrains/alphafold3-pytorch
Implementation of Alphafold 3 from Google Deepmind in Pytorch
cuda-mode/resource-stream
CUDA related news and material links
FAIR-Chem/fairchem
FAIR Chemistry's library of machine learning methods for chemistry
assertpy/assertpy
Simple assertion library for unit testing in python with a fluent API
datamol-io/datamol
Molecular Processing Made Easy.
JuDFTteam/best-of-atomistic-machine-learning
🏆 A ranked list of awesome atomistic machine learning projects ⚛️🧬💎.
allenai/python-package-template
A template repo for Python packages
fferflo/einx
Universal Tensor Operations in Einstein-Inspired Notation for Python.
baaihealth/OpenComplex
Trainable PyTorch framework for developing protein, RNA and complex models.
dauparas/LigandMPNN
alan-turing-institute/rse-course
Materials for The Alan Turing Institute's Research Software Engineering course
nrokh/ScientificFigures
A comprehensive guide on how to create beautiful scientific figures for technical publications, presentations, and posters
aqlaboratory/genie2
Protein structure diffusion model for unconditional protein generation and motif scaffolding
anton-bushuiev/PPIRef
Dataset and package for working with protein-protein interactions in 3D
cch1999/posecheck
Pose checks for 3D Structure-based Drug Design methods
google-deepmind/nuclease_design
ML-guided enzyme engineering
mirunacrt/synflownet
A GFlowNet with a chemical synthesis action space.
Doudna-lab/GARNET_DL
rdnfn/icai
Inverse Constitutional AI: compressing pairwise preference data into a short constitution of principles.
Croydon-Brixton/proteinmpnn_wrapper
A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files
Hollfelder-Lab/lrDMS-IRED
Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details.