Deep-MI/fsqc

Issues

• Numpy error causes surface module to fail

  #64 opened 2 months ago by araikes
  3

• Value: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte

  #63 opened 2 months ago by matthewlyyy01
  1

• Add option to run the tool at the subject level or group level

  #58 opened 7 months ago by costantinoai
  2

• Add option to run subjects in parallel

  #57 opened 7 months ago by costantinoai
  2

• Add option to set a temporary working directory

  #56 opened 7 months ago by costantinoai
  4

• --shape flag not working

  #39 opened 2 years ago by XinQi7788
  7

• Outlier module not working with FastSurfer 2.2.0 output

  #54 opened 10 months ago by acossa
  2

• Docker / singularity links are wrong in documentation

  #52 opened 10 months ago by RDoerfel
  1

• WM snr discrepancy between qatools and mri_segstats --qa-stats

  #38 opened a year ago by WilliamFCB
  1

• Error installing fsqc via pip

  #48 opened 2 years ago by RDoerfel
  4

• ERROR: screenshots/fornix module failed for subject ...

  #43 opened 2 years ago by RDoerfel
  8

• --screenshots-html, --fornix-html not working

  #36 opened 2 years ago by BadCoder98
  3

• no screenshots occurring

  #25 opened 2 years ago by hjbockholt
  6

• Dockerfile: missing skimage dependency

  #33 opened 2 years ago by ajschadler12
  4

• Replace all FreeSurfer calls with python

  #20 opened 2 years ago by m-reuter
  4

• How open .stats file created by -outlier flag

  #44 opened 2 years ago by parinazbabaee
  1

• how to conduct group level consolidation on individual results?

  #40 opened 2 years ago by XinQi7788
  1

• Brainprint running twice?

  #37 opened 2 years ago by robbwh
  1

• Screenshots in reversed left/right orientation

  #28 opened 2 years ago by ncbss
  6

• Dockerfile: fails to build due to kiwisolver dropping support for python 3.6.9 in 1.3.2

  #30 opened 2 years ago by ajschadler12
  1

• Additional (inflated) surface views to match FS5 QA tool

  #23 opened 2 years ago by Dominic-Arold
  3

• Check/Fix fastsurfer integration

  #19 opened 2 years ago by m-reuter
  3

• Check skull stripping

  #27 opened 2 years ago by ncbss
  2

• unbuntu terminal frozen while encounter issue with surface overlaid

  #8 opened 2 years ago by XinQi7788
  49

• Dockerfile encountered an issue

  #17 opened 3 years ago by XinQi7788
  4

• Screenshots and fornix module failed for subject

  #21 opened 3 years ago by enjoy-our-life
  9

• qatools-python singularity integration

  #18 opened 3 years ago by narloncassio
  1

• Usability of qatools installed in python environment for non-programmers

  #14 opened 3 years ago by Dominic-Arold
  2

• Screenshots module fails to select (default) slices when voxel size different than 1mm

  #11 opened 3 years ago by dmartindeblas
  1

• A problem occurred with the surface overlays

  #7 opened 3 years ago by XinQi7788
  3

• ValueError: array must not contain infs or NaNs

  #6 opened 3 years ago by XinQi7788
  4

• about generating cortical parcellation screen shots & html files with consolidated screen shots

  #5 opened 3 years ago by XinQi7788
  2

• processing multiple subjects from a list of subject IDs saved in a text file

  #4 opened 3 years ago by XinQi7788
  4

• brainprintpython

  #3 opened 4 years ago by slieped
  2

• Normal range for computed values

  #2 opened 4 years ago by xjyang
  4

• Can this scripts be used for FastSurfer processed structural MRI data?

  #1 opened 4 years ago by debinz
  1