DessimozLab/OMArk

Issues

• Problems running omark - list index out of range

  #34 opened 3 months ago by claraptzsl
  2

• Problem during writing step of OMArK

  #33 opened 4 months ago by Enorya
  2

• genus not available for taxonomic ranking

  #32 opened 7 months ago by SAMtoBAM
  0

• Homininae prebuilt database - Problem

  #30 opened a year ago by rlibouba
  4

• Fragmented proteins

  #22 opened 7 months ago by DiegoSafian
  3

• KeyError: 'Filename' in plot_all_results.py

  #21 opened 7 months ago by StepanSaenko
  3

• Question about Inconsistent HOG

  #23 opened 7 months ago by xiaoyezao
  3

• remove contaminants

  #19 opened 7 months ago by xiaoyezao
  4

• Script 'scripts/omark' not found in metadata at omark-0.3.0.dist-info

  #29 opened 9 months ago by xiuru
  0

• HOG taxonomy seems buggy

  #28 opened 10 months ago by MmasterT
  1

• run standalone omark

  #27 opened 10 months ago by bitezhu
  2

• Granulosicoccus genera not being classified in a good way by omark

  #26 opened 10 months ago by Bio-finder
  4

• omark_contextualize.py ERRORS: Max retries exceeded / Too many open files

  #25 opened a year ago by nam-hoang
  4

• Support python >3.11

  #12 opened 2 years ago by vkkodali
  3

• OMArk error

  #13 opened a year ago by vkkodali
  5

• IndexError: list index out of range

  #20 opened a year ago by StepanSaenko
  2

• DB file is not well formated

  #11 opened 2 years ago by arnkress
  1

• Companion script for combined plot?

  #9 opened 2 years ago by dirkjanvw
  4

• Webserver job throws an error after 10 minutes

  #8 opened 2 years ago by kkowalden
  3