EBI-Metagenomics/workflow-is-cwl

Issues

• Trinity: Add test inputs and expected outputs

  #4 opened 6 years ago by mscheremetjew
  4

• cwlexec: InterProScan5 result file is not mapped to the output binding

  #34 opened 6 years ago by mscheremetjew
  0

• Validating the complete assembly workflow

  #32 opened 6 years ago by arnaudmeng
  2

• Select, test and review Trimmomatic container

  #23 opened 6 years ago by mscheremetjew
  3

• Test and review Trinity container

  #24 opened 6 years ago by mscheremetjew
  0

• Trimmomatic: Add test inputs and expected outputs

  #6 opened 6 years ago by mscheremetjew
  1

• Trimmomatic: Added Docker requirement and test the container

  #7 opened 6 years ago by mscheremetjew
  1

• BUSCO: Backslash char is not supported in FASTA header - Add FASTA header cleaning step

  #18 opened 6 years ago by mscheremetjew
  1

• Transrate: Improve Docker image

  #10 opened 6 years ago by mscheremetjew
  8

• Transrate: Command line tool version with local installation is not working using cwl-runner

  #8 opened 6 years ago by mscheremetjew
  1

• Transrate: Add test inputs and expected outputs

  #9 opened 6 years ago by mscheremetjew
  1

• InterProScan: Still don;t have a working version of a container

  #12 opened 6 years ago by mscheremetjew
  1

• BUSCO: Docker container doesn't write any results onto the local file system!

  #11 opened 6 years ago by mscheremetjew
  3

• FastQC: Create Docker container for version 0.11.7

  #3 opened 6 years ago by mscheremetjew
  2

• Trinity: Set up integration test

  #5 opened 6 years ago by mscheremetjew
  0